RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 OR2J1Q9GZK6 312 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 PSG11Q9UQ72 335 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 CELA2AP08217 269 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 NKX6-1P78426 367 aaPredicted RBP11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 PSG4Q00888 419 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 THNSL2Q86YJ6 484 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 TAS2R5Q9NYW4 299 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 GCSHP23434 173 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 GATA3P23771 443 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 CLDN12P56749 244 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 SMN1Q16637 294 aaKnown RBP11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 OR2T35Q8NGX2 323 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 Q8WTZ3 238 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 TRBV5-3A0A0A0MS03 114 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 PPIAL4CA0A0B4J2A2 164 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 SNRPGP15A8MWD9 76 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 UPK3AO75631 287 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 ACSM4P0C7M7 580 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 PPIAL4GP0DN37 164 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 GNB3P16520 340 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 RAB5CP51148 216 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 MSRB3Q8IXL7 192 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 SERTAD4Q9NUC0 356 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 RPL36A-HNRNPH2H7BZ11 118 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 DVL1O14640 695 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 OGG1O15527 345 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 TIAF1O95411 115 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 DVL1P1P54792 670 aaPredicted RBP11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 ZNF66Q6ZN08 573 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 ZNF385AQ96PM9 386 aaKnown RBP11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 PSENENQ9NZ42 101 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 DSPPQ9NZW4 1301 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 TRAV30A0A087WSZ9 112 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 HRKO00198 91 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 AGAP20933 346 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 BBS1Q8NFJ9 593 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 OR9G1Q8NH87 305 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 RTN4IP1Q8WWV3 396 aaPredicted RBP11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 OR5M11Q96RB7 305 aa11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 RBMX2Q9Y388 322 aaKnown RBP11.69□□□□□ -0.54
PRPF38A-201ENST00000257181 PDZK1IP1Q13113 114 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 TMEM268Q5VZI3 342 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 ZNF788Q6ZQV5 615 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 SCMH1Q96GD3 660 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 PRSS50Q9UI38 385 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 FAM106AQ4KMX7 169 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 IL34Q6ZMJ4 242 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 SLC7A6Q92536 515 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 OR4C12Q96R67 309 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 STARD10Q9Y365 291 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 A0A1B0GTL3 188 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 CDIPTO14735 213 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 WNT9BO14905 357 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 JTBO76095 146 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 OR5G3P0C626 314 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 SMIM17P0DL12 118 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 PF4V1P10720 104 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 PTGDSP41222 190 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 OR3A1P47881 315 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 ABLIM2Q6H8Q1 611 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 SUMF2Q8NBJ7 301 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 UBAC2Q8NBM4 344 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 C14orf79Q96F83 325 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 SSBP3Q9BWW4 388 aaPredicted RBP11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 CLEC7AQ9BXN2 247 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 CNTNAP3Q9BZ76 1288 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 CHODLQ9H9P2 273 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 IDI2-AS1Q9NZ38 188 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 NUPL2O15504 423 aaKnown RBP11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 OR10J4P0C629 311 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 TNXAQ16473 311 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 STXBP6Q8NFX7 210 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 OR1L8Q8NGR8 309 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 ITLN1Q8WWA0 313 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 NPFFR1Q9GZQ6 430 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 ZMIZ1Q9ULJ6 1067 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 WASHC3Q9Y3C0 194 aa11.68□□□□□ -0.54
PRPF38A-201ENST00000257181 FAM169BQ8N8A8 192 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 CST9LP1Q5W188 147 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 SLC16A12Q6ZSM3 486 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 ZNF546Q86UE3 836 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 C2orf50Q96LR7 162 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 TMEM229AB2RXF0 380 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 FSTP19883 344 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 EFNA4P52798 201 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 MMD2Q8IY49 270 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 PARP16Q8N5Y8 322 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 CELF2-AS1Q8N7Q2 184 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 MRGPRDQ8TDS7 321 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 ASPDHA6ND91 283 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 ATP6V1G2-DDX39BF2Z307 99 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 FCGR3BO75015 233 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 IGKV1D-16P01601 117 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 TMEM11P17152 192 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 C3orf36Q3SXR2 165 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 DNM1P46Q6ZS02 220 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 GIMAP1Q8WWP7 306 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 RPL3LQ92901 407 aaKnown RBP11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 DOCK3Q8IZD9 2030 aa11.67□□□□□ -0.54
PRPF38A-201ENST00000257181 MEIOCA2RUB1 952 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms