RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 TUBGCP6Q96RT7 1819 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 CXorf1O96002 111 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 NAAAQ02083 359 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 UBALD2Q8IYN6 164 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 LRRC75AQ8NAA5 344 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 RHNO1Q9BSD3 238 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 ANXA10Q9UJ72 324 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 SH2D5Q6ZV89 423 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 CTAG2O75638 210 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 SLC35B1P78383 322 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 LIAT1Q6ZQX7 453 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 OR10S1Q8NGN2 331 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 ABHD1Q96SE0 405 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 PAAF1Q9BRP4 392 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 BOKQ9UMX3 212 aaPredicted RBP13.48□□□□□ -0.25
COL5A1-208ENST00000618395 HERPUD1Q15011 391 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 GABRG3Q99928 467 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 FLRT3Q9NZU0 649 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 ICAM5Q9UMF0 924 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 COL5A2P05997 1499 aaPredicted RBP13.48□□□□□ -0.25
COL5A1-208ENST00000618395 C3orf85A0A1B0GTC6 90 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 NPIPB8E9PQR5 432 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 NPIPB9F8W1W9 429 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 NPIPB7O75200 414 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 RPS16P62249 146 aaKnown RBP13.48□□□□□ -0.25
COL5A1-208ENST00000618395 MRPS24Q96EL2 167 aaKnown RBP13.48□□□□□ -0.25
COL5A1-208ENST00000618395 CSF3RQ99062 836 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 CHRNA10Q9GZZ6 450 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 MTCH2Q9Y6C9 303 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 H1FOOQ8IZA3 346 aaPredicted RBP13.47□□□□□ -0.25
COL5A1-208ENST00000618395 BHLHE23Q8NDY6 225 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 CD99L2Q8TCZ2 262 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 P2RY12Q9H244 342 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 RCC2Q9P258 522 aaKnown RBP13.47□□□□□ -0.25
COL5A1-208ENST00000618395 ITGB4P16144 1822 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 C9orf135Q5VTT2 229 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 BATF2Q8N1L9 274 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 OR52E1Q8NGJ3 308 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 CYR61O00622 381 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 GSTZ1O43708 216 aaPredicted RBP13.47□□□□□ -0.25
COL5A1-208ENST00000618395 FGF2P09038 288 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 ADRA1AP35348 466 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 FBLN7Q53RD9 439 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 ZMIZ1Q9ULJ6 1067 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 F11RQ9Y624 299 aaKnown RBP13.47□□□□□ -0.25
COL5A1-208ENST00000618395 SPCS1Q9Y6A9 102 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 TWIST1Q15672 202 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 APOBEC3BQ9UH17 382 aaKnown RBP13.47□□□□□ -0.25
COL5A1-208ENST00000618395 DOCK3Q8IZD9 2030 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 NMBP08949 121 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 RELBQ01201 579 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 ANKRD37Q7Z713 158 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 ASCL3Q9NQ33 180 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 TMEM272A0A1B0GTI8 110 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 RNASE1P07998 156 aaKnown RBP13.47□□□□□ -0.25
COL5A1-208ENST00000618395 SEC11BP0C7V7 166 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 FKBP2P26885 142 aaKnown RBP13.47□□□□□ -0.25
COL5A1-208ENST00000618395 RABIFP47224 123 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 XKR7Q5GH72 579 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 MED25Q71SY5 747 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 PARS2Q7L3T8 475 aaKnown RBP13.47□□□□□ -0.25
COL5A1-208ENST00000618395 NKAIN4Q8IVV8 208 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 PERPQ96FX8 193 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 DPRXA6NFQ7 191 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 MMP9P14780 707 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 GDF1P27539 372 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 MZB1Q8WU39 189 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 INSL5Q9Y5Q6 135 aa13.47□□□□□ -0.25
COL5A1-208ENST00000618395 TNRC6AQ8NDV7 1962 aaKnown RBP13.46□□□□□ -0.25
COL5A1-208ENST00000618395 WDR34Q96EX3 536 aa13.46□□□□□ -0.25
COL5A1-208ENST00000618395 OR2V2Q96R30 315 aa13.46□□□□□ -0.25
COL5A1-208ENST00000618395 CACNG5Q9UF02 275 aa13.46□□□□□ -0.25
COL5A1-208ENST00000618395 NWD2Q9ULI1 1742 aa13.46□□□□□ -0.25
COL5A1-208ENST00000618395 WNT11O96014 354 aa13.46□□□□□ -0.25
COL5A1-208ENST00000618395 RARRES2Q99969 163 aa13.46□□□□□ -0.25
COL5A1-208ENST00000618395 PCMT1P22061 227 aa13.46□□□□□ -0.25
COL5A1-208ENST00000618395 TMEM56Q96MV1 263 aa13.46□□□□□ -0.25
COL5A1-208ENST00000618395 MBNL1Q9NR56 388 aaKnown RBP13.46□□□□□ -0.25
COL5A1-208ENST00000618395 NEU3Q9UQ49 428 aa13.46□□□□□ -0.25
COL5A1-208ENST00000618395 A1L4Q6 167 aa13.46□□□□□ -0.25
COL5A1-208ENST00000618395 MFAP2P55001 183 aa13.46□□□□□ -0.25
COL5A1-208ENST00000618395 IGFBP7Q16270 282 aa13.46□□□□□ -0.25
COL5A1-208ENST00000618395 PBOV1Q9GZY1 135 aa13.46□□□□□ -0.25
COL5A1-208ENST00000618395 NGBQ9NPG2 151 aa13.46□□□□□ -0.25
COL5A1-208ENST00000618395 A0A1W2PQU0 124 aa13.46□□□□□ -0.26
COL5A1-208ENST00000618395 DEFB119Q8N690 84 aa13.46□□□□□ -0.26
COL5A1-208ENST00000618395 ABHD3Q8WU67 409 aa13.46□□□□□ -0.26
COL5A1-208ENST00000618395 STARD5Q9NSY2 213 aa13.46□□□□□ -0.26
COL5A1-208ENST00000618395 FCGR3AP08637 254 aa13.46□□□□□ -0.26
COL5A1-208ENST00000618395 UBE2L3P68036 154 aaKnown RBP13.46□□□□□ -0.26
COL5A1-208ENST00000618395 CLDN10P78369 228 aa13.46□□□□□ -0.26
COL5A1-208ENST00000618395 C1orf140Q5VVS0 124 aa13.46□□□□□ -0.26
COL5A1-208ENST00000618395 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.46□□□□□ -0.26
COL5A1-208ENST00000618395 TMEM38BQ9NVV0 291 aa13.46□□□□□ -0.26
COL5A1-208ENST00000618395 V9GYH0 126 aa13.46□□□□□ -0.26
COL5A1-208ENST00000618395 LYZL6O75951 148 aa13.46□□□□□ -0.26
COL5A1-208ENST00000618395 HBZP02008 142 aa13.46□□□□□ -0.26
COL5A1-208ENST00000618395 ACER2Q5QJU3 275 aa13.46□□□□□ -0.26
COL5A1-208ENST00000618395 ZNF841Q6ZN19 808 aa13.46□□□□□ -0.26
COL5A1-208ENST00000618395 TP53INP2Q8IXH6 220 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms