RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 USP43Q70EL4 1123 aa13.67□□□□□ -0.22
SPTSSB-204ENST00000617024 SLC36A1Q7Z2H8 476 aa13.67□□□□□ -0.22
SPTSSB-204ENST00000617024 LYPD6Q86Y78 171 aa13.67□□□□□ -0.22
SPTSSB-204ENST00000617024 OR8B3Q8NGG8 313 aa13.67□□□□□ -0.22
SPTSSB-204ENST00000617024 ANGPTL6Q8NI99 470 aa13.67□□□□□ -0.22
SPTSSB-204ENST00000617024 MED30Q96HR3 178 aa13.67□□□□□ -0.22
SPTSSB-204ENST00000617024 KCTD7Q96MP8 289 aa13.67□□□□□ -0.22
SPTSSB-204ENST00000617024 OR8B2Q96RD0 313 aa13.67□□□□□ -0.22
SPTSSB-204ENST00000617024 DNTTIP1Q9H147 329 aa13.67□□□□□ -0.22
SPTSSB-204ENST00000617024 HMG20AQ9NP66 347 aa13.67□□□□□ -0.22
SPTSSB-204ENST00000617024 RBFOX1Q9NWB1 397 aaKnown RBP13.67□□□□□ -0.22
SPTSSB-204ENST00000617024 KAAG1Q9UBP8 84 aa13.67□□□□□ -0.22
SPTSSB-204ENST00000617024 GLS2Q9UI32 602 aa13.67□□□□□ -0.22
SPTSSB-204ENST00000617024 MRPS28Q9Y2Q9 187 aaKnown RBP13.67□□□□□ -0.22
SPTSSB-204ENST00000617024 F5H0A9 414 aaPredicted RBP13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 TMPRSS2O15393 492 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 CLPXO76031 633 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 CDRT1O95170 752 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 HTR3BO95264 441 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 CSTBP04080 98 aaKnown RBP13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 SFTPBP07988 381 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 CALCBP10092 127 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 RANBP1P43487 201 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 MTNR1BP49286 362 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 GPR176Q14439 515 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 SPCS2Q15005 226 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 ESCO2Q56NI9 601 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 C1orf100Q5SVJ3 147 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 ELP2Q6IA86 826 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 GLIPR1L1Q6UWM5 242 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 LINC00299Q6ZSB3 139 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 LINC01356Q8N9X3 169 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 OR4D6Q8NGJ1 314 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 C1orf159Q96HA4 380 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 OR14J1Q9UGF5 321 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 V9GY05 133 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 CR1P17927 2039 aa13.66□□□□□ -0.22
SPTSSB-204ENST00000617024 YLPM1P49750 1951 aaKnown RBP13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 IGKV1D-17A0A075B6S4 117 aa13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 NKX6-3A6NJ46 265 aa13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 FAM157AC9JC47 383 aa13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 ZNF780AO75290 641 aaPredicted RBP13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 IGHV4-31P0DP07 118 aa13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 RAB3BP20337 219 aa13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 PITPNBP48739 271 aa13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 VBP1P61758 197 aa13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 LSM3P62310 102 aaKnown RBP13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 DCTN2Q13561 401 aaKnown RBP13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 AWAT2Q6E213 333 aa13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 ZNF788Q6ZQV5 615 aa13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 TPRA1Q86W33 373 aa13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 CD177Q8N6Q3 437 aa13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 OR10K1Q8NGX5 313 aa13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 CENPOQ9BU64 300 aa13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 SEBOXQ9HB31 216 aaPredicted RBP13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 PLGRKTQ9HBL7 147 aa13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 IL36GQ9NZH8 169 aa13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 GHRLQ9UBU3 117 aa13.65□□□□□ -0.22
SPTSSB-204ENST00000617024 B4DSR2 109 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 SH2D1BO14796 132 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 NDUFB3O43676 98 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 FOXH1O75593 365 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 CHRM2P08172 466 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 AMY2BP19961 511 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 HTR2CP28335 458 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 NPY4RP50391 375 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 FGF12P61328 243 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 GNB2P62879 340 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 IL13RA1P78552 427 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 ZNF146Q15072 292 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 SLC22A6Q4U2R8 563 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 ZNF841Q6ZN19 808 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 CROCCP3Q8IVE0 287 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 ZNF561Q8N587 486 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 Q8NFD4 153 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 TBC1D15Q8TC07 691 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 SDSLQ96GA7 329 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 GAFA1Q96PS6 74 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 GFI1Q99684 422 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 SSBP3Q9BWW4 388 aaPredicted RBP13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 RNF167Q9H6Y7 350 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 CLN8Q9UBY8 286 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 ZNF222Q9UK12 451 aa13.64□□□□□ -0.23
SPTSSB-204ENST00000617024 SHISA3A0PJX4 238 aa13.63□□□□□ -0.23
SPTSSB-204ENST00000617024 SLC17A2O00624 439 aa13.63□□□□□ -0.23
SPTSSB-204ENST00000617024 DVL1O14640 695 aa13.63□□□□□ -0.23
SPTSSB-204ENST00000617024 SIGLEC5O15389 551 aa13.63□□□□□ -0.23
SPTSSB-204ENST00000617024 TGFAP01135 160 aa13.63□□□□□ -0.23
SPTSSB-204ENST00000617024 TFF1P04155 84 aa13.63□□□□□ -0.23
SPTSSB-204ENST00000617024 UBBP0CG47 229 aa13.63□□□□□ -0.23
SPTSSB-204ENST00000617024 SERPINA2P20848 420 aa13.63□□□□□ -0.23
SPTSSB-204ENST00000617024 DUSP1P28562 367 aa13.63□□□□□ -0.23
SPTSSB-204ENST00000617024 CAPZA1P52907 286 aa13.63□□□□□ -0.23
SPTSSB-204ENST00000617024 SNU13P55769 128 aaKnown RBP13.63□□□□□ -0.23
SPTSSB-204ENST00000617024 SEC61A1P61619 476 aaKnown RBP13.63□□□□□ -0.23
SPTSSB-204ENST00000617024 IKZF1Q13422 519 aa13.63□□□□□ -0.23
SPTSSB-204ENST00000617024 LRRC10Q5BKY1 277 aa13.63□□□□□ -0.23
SPTSSB-204ENST00000617024 SPIN3Q5JUX0 258 aa13.63□□□□□ -0.23
SPTSSB-204ENST00000617024 WDR25Q64LD2 544 aaPredicted RBP13.63□□□□□ -0.23
SPTSSB-204ENST00000617024 OSR2Q8N2R0 312 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms