RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 ZNF91Q05481 1191 aa16.69■□□□□ 0.26
TRAPPC3-208ENST00000616074 SLC34A1Q06495 639 aa16.69■□□□□ 0.26
TRAPPC3-208ENST00000616074 GRK1Q15835 563 aa16.69■□□□□ 0.26
TRAPPC3-208ENST00000616074 ARSJQ5FYB0 599 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC3-208ENST00000616074 MINOS1Q5TGZ0 78 aa16.69■□□□□ 0.26
TRAPPC3-208ENST00000616074 OR10H4Q8NGA5 316 aa16.69■□□□□ 0.26
TRAPPC3-208ENST00000616074 ADI1Q9BV57 179 aa16.69■□□□□ 0.26
TRAPPC3-208ENST00000616074 RBFOX1Q9NWB1 397 aaKnown RBP16.69■□□□□ 0.26
TRAPPC3-208ENST00000616074 MINOS1-NBL1R4GNA1 71 aa16.69■□□□□ 0.26
TRAPPC3-208ENST00000616074 LOC107986453A0A1B0GWG9 222 aa16.68■□□□□ 0.26
TRAPPC3-208ENST00000616074 PSPNO60542 156 aa16.68■□□□□ 0.26
TRAPPC3-208ENST00000616074 SULT1C4O75897 302 aa16.68■□□□□ 0.26
TRAPPC3-208ENST00000616074 GABRR1P24046 479 aa16.68■□□□□ 0.26
TRAPPC3-208ENST00000616074 PEX2P28328 305 aa16.68■□□□□ 0.26
TRAPPC3-208ENST00000616074 DUSP1P28562 367 aa16.68■□□□□ 0.26
TRAPPC3-208ENST00000616074 VDAC2P45880 294 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC3-208ENST00000616074 NPBWR2P48146 333 aa16.68■□□□□ 0.26
TRAPPC3-208ENST00000616074 CCDC54Q8NEL0 328 aa16.68■□□□□ 0.26
TRAPPC3-208ENST00000616074 NDNFQ8TB73 568 aa16.68■□□□□ 0.26
TRAPPC3-208ENST00000616074 MRAPQ8TCY5 172 aa16.68■□□□□ 0.26
TRAPPC3-208ENST00000616074 TMEM133Q9H2Q1 129 aa16.68■□□□□ 0.26
TRAPPC3-208ENST00000616074 SEBOXQ9HB31 216 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC3-208ENST00000616074 MMP23AO75900 390 aa16.67■□□□□ 0.26
TRAPPC3-208ENST00000616074 SERPINA3P01011 423 aa16.67■□□□□ 0.26
TRAPPC3-208ENST00000616074 BCL3P20749 454 aa16.67■□□□□ 0.26
TRAPPC3-208ENST00000616074 POLR2IP36954 125 aaKnown RBP16.67■□□□□ 0.26
TRAPPC3-208ENST00000616074 KIR3DL2P43630 455 aa16.67■□□□□ 0.26
TRAPPC3-208ENST00000616074 ZDHHC13Q8IUH4 622 aa16.67■□□□□ 0.26
TRAPPC3-208ENST00000616074 Q8IYB0 196 aa16.67■□□□□ 0.26
TRAPPC3-208ENST00000616074 ENTHD1Q8IYW4 607 aa16.67■□□□□ 0.26
TRAPPC3-208ENST00000616074 RDH10Q8IZV5 341 aa16.67■□□□□ 0.26
TRAPPC3-208ENST00000616074 C10orf35Q96D05 121 aa16.67■□□□□ 0.26
TRAPPC3-208ENST00000616074 CIB1Q99828 191 aa16.67■□□□□ 0.26
TRAPPC3-208ENST00000616074 CLEC7AQ9BXN2 247 aa16.67■□□□□ 0.26
TRAPPC3-208ENST00000616074 ENOPH1Q9UHY7 261 aa16.67■□□□□ 0.26
TRAPPC3-208ENST00000616074 IGKV1-9A0A0C4DH69 117 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 TRBV2A0A0J9YWF9 115 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 FAM90A22PA8MWA6 464 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 ENTPD6O75354 484 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 UBCP0CG48 685 aaKnown RBP16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 CALCBP10092 127 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 POU3F4P49335 361 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 RBP2P50120 134 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 ATP1B3P54709 279 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 SNU13P55769 128 aaKnown RBP16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 ISL1P61371 349 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 ZNF85Q03923 595 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 TP53I3Q53FA7 332 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 AMIGO2Q86SJ2 522 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 FAM58AQ8N1B3 248 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 DNAAF1Q8NEP3 725 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 OR4P4Q8NGL7 312 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 PP6455Q8WZ26 134 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 SGCDQ92629 289 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 RNF166Q96A37 237 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 PHF21AQ96BD5 680 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 ADAT3Q96EY9 351 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 OCSTAMPQ9BR26 566 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 NECAP2Q9NVZ3 263 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 AURKAIP1Q9NWT8 199 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 GNG8Q9UK08 70 aa16.66■□□□□ 0.26
TRAPPC3-208ENST00000616074 MGST3O14880 152 aa16.65■□□□□ 0.26
TRAPPC3-208ENST00000616074 ALDOBP05062 364 aa16.65■□□□□ 0.26
TRAPPC3-208ENST00000616074 PRKACAP17612 351 aa16.65■□□□□ 0.26
TRAPPC3-208ENST00000616074 AZGP1P25311 298 aaKnown RBP16.65■□□□□ 0.26
TRAPPC3-208ENST00000616074 FASP25445 335 aa16.65■□□□□ 0.26
TRAPPC3-208ENST00000616074 ATP6V1E1P36543 226 aa16.65■□□□□ 0.26
TRAPPC3-208ENST00000616074 OR3A1P47881 315 aa16.65■□□□□ 0.26
TRAPPC3-208ENST00000616074 ZNF146Q15072 292 aa16.65■□□□□ 0.26
TRAPPC3-208ENST00000616074 BAIAP2L2Q6UXY1 529 aa16.65■□□□□ 0.26
TRAPPC3-208ENST00000616074 ZBTB49Q6ZSB9 765 aa16.65■□□□□ 0.26
TRAPPC3-208ENST00000616074 TRAPPC6BQ86SZ2 158 aa16.65■□□□□ 0.26
TRAPPC3-208ENST00000616074 BCAS4Q8TDM0 211 aa16.65■□□□□ 0.26
TRAPPC3-208ENST00000616074 A0A1W2PRX2 142 aa16.64■□□□□ 0.25
TRAPPC3-208ENST00000616074 CYB5AP00167 134 aa16.64■□□□□ 0.25
TRAPPC3-208ENST00000616074 HTR1DP28221 377 aa16.64■□□□□ 0.25
TRAPPC3-208ENST00000616074 ERP29P30040 261 aaKnown RBP16.64■□□□□ 0.25
TRAPPC3-208ENST00000616074 P2RX3P56373 397 aa16.64■□□□□ 0.25
TRAPPC3-208ENST00000616074 LOXL3P58215 753 aa16.64■□□□□ 0.25
TRAPPC3-208ENST00000616074 FAM220AQ7Z4H9 259 aa16.64■□□□□ 0.25
TRAPPC3-208ENST00000616074 OR5AU1Q8NGC0 362 aa16.64■□□□□ 0.25
TRAPPC3-208ENST00000616074 EME1Q96AY2 570 aa16.64■□□□□ 0.25
TRAPPC3-208ENST00000616074 GABARAPL3Q9BY60 117 aa16.64■□□□□ 0.25
TRAPPC3-208ENST00000616074 RIBC2Q9H4K1 309 aa16.64■□□□□ 0.25
TRAPPC3-208ENST00000616074 UBE2J1Q9Y385 318 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC3-208ENST00000616074 AP4S1Q9Y587 144 aa16.64■□□□□ 0.25
TRAPPC3-208ENST00000616074 KIAA2026Q5HYC2 2103 aa16.64■□□□□ 0.25
TRAPPC3-208ENST00000616074 SIRPB1O00241 398 aa16.63■□□□□ 0.25
TRAPPC3-208ENST00000616074 ATF1P18846 271 aa16.63■□□□□ 0.25
TRAPPC3-208ENST00000616074 CD24P25063 80 aa16.63■□□□□ 0.25
TRAPPC3-208ENST00000616074 MTCP1P56278 107 aa16.63■□□□□ 0.25
TRAPPC3-208ENST00000616074 CD83Q01151 205 aa16.63■□□□□ 0.25
TRAPPC3-208ENST00000616074 TMED1Q13445 227 aa16.63■□□□□ 0.25
TRAPPC3-208ENST00000616074 IL18R1Q13478 541 aa16.63■□□□□ 0.25
TRAPPC3-208ENST00000616074 SPIN3Q5JUX0 258 aa16.63■□□□□ 0.25
TRAPPC3-208ENST00000616074 PRAMEF5Q5TYX0 476 aa16.63■□□□□ 0.25
TRAPPC3-208ENST00000616074 OR8J1Q8NGP2 316 aa16.63■□□□□ 0.25
TRAPPC3-208ENST00000616074 TMEM244Q5VVB8 128 aa16.62■□□□□ 0.25
TRAPPC3-208ENST00000616074 FOXB2Q5VYV0 432 aa16.62■□□□□ 0.25
TRAPPC3-208ENST00000616074 LHFPL2Q6ZUX7 228 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms