RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	DOCK6	Q96HP0	2047 aa		10.91	□□□□□ -0.66
ABCA2-223	ENST00000614293	GTF3C1	Q12789	2109 aa		10.91	□□□□□ -0.66
ABCA2-223	ENST00000614293	PLXNA1	Q9UIW2	1896 aa		10.91	□□□□□ -0.66
ABCA2-223	ENST00000614293	CA6	P23280	308 aa		10.91	□□□□□ -0.66
ABCA2-223	ENST00000614293	WDR73	Q6P4I2	378 aa		10.91	□□□□□ -0.66
ABCA2-223	ENST00000614293	OR5AP2	Q8NGF4	316 aa		10.91	□□□□□ -0.66
ABCA2-223	ENST00000614293	HSPB8	Q9UJY1	196 aa		10.91	□□□□□ -0.66
ABCA2-223	ENST00000614293	NHSL1	Q5SYE7	1610 aa		10.91	□□□□□ -0.66
ABCA2-223	ENST00000614293	IGSF23	A1L1A6	192 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	C2CD4C	Q8TF44	421 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	ATOH8	Q96SQ7	321 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	LRRC61	Q9BV99	259 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	CHODL	Q9H9P2	273 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	PSORS1C1	Q9UIG5	152 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	SF3B6	Q9Y3B4	125 aa	Known RBP	10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	OR10C1	Q96KK4	312 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	ZFP64	Q9NPA5	681 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	COL18A1	P39060	1754 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	PRSS1	P07477	247 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	LYG2	Q86SG7	212 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	WFDC3	Q8IUB2	231 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	FAM219A	Q8IW50	185 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	OR1L6	Q8NGR2	347 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	TMEM167B	Q9NRX6	74 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	WASHC3	Q9Y3C0	194 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	CST2	P09228	141 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	PSMB6	P28072	239 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	ECSCR	Q19T08	205 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	ZNF665	Q9H7R5	613 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	NAA60	Q9H7X0	242 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	SCN5A	Q14524	2016 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	SIX6	O95475	246 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	GYPA	P02724	150 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293	OR1N2	Q8NGR9	330 aa		10.9	□□□□□ -0.66
ABCA2-223	ENST00000614293		A0A0U1RQS6	177 aa		10.9	□□□□□ -0.67
ABCA2-223	ENST00000614293	TMPRSS11D	O60235	418 aa		10.9	□□□□□ -0.67
ABCA2-223	ENST00000614293	SRSF9	Q13242	221 aa	Known RBP eCLIP	10.9	□□□□□ -0.67
ABCA2-223	ENST00000614293	CELF2-AS1	Q8N7Q2	184 aa		10.9	□□□□□ -0.67
ABCA2-223	ENST00000614293	RAB40C	Q96S21	281 aa		10.9	□□□□□ -0.67
ABCA2-223	ENST00000614293	DOK1	Q99704	481 aa		10.9	□□□□□ -0.67
ABCA2-223	ENST00000614293	PCGF1	Q9BSM1	259 aa		10.9	□□□□□ -0.67
ABCA2-223	ENST00000614293	MAP1LC3C	Q9BXW4	147 aa		10.9	□□□□□ -0.67
ABCA2-223	ENST00000614293	OR4E1	P0C645	316 aa		10.9	□□□□□ -0.67
ABCA2-223	ENST00000614293	NUTF2	P61970	127 aa	Known RBP	10.9	□□□□□ -0.67
ABCA2-223	ENST00000614293	ZNF343	Q6P1L6	599 aa		10.9	□□□□□ -0.67
ABCA2-223	ENST00000614293	ZNF793	Q6ZN11	406 aa		10.9	□□□□□ -0.67
ABCA2-223	ENST00000614293	OR52M1	Q8NGK5	317 aa		10.9	□□□□□ -0.67
ABCA2-223	ENST00000614293	MOGAT1	Q96PD6	335 aa		10.9	□□□□□ -0.67
ABCA2-223	ENST00000614293	TRAPPC1	Q9Y5R8	145 aa		10.9	□□□□□ -0.67
ABCA2-223	ENST00000614293	TMEM238L	A0A1B0GVL6	79 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293		A6NJY4	79 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	CEP290	O15078	2479 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	AQP8	O94778	261 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	PRSS12	P56730	875 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	FCN2	Q15485	313 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	RNASEK	Q6P5S7	137 aa	Known RBP	10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	PIPOX	Q9P0Z9	390 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	SRD5A2	P31213	254 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	CLDN18	P56856	261 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	FOXO1	Q12778	655 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	FAM209A	Q5JX71	171 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	FAM109B	Q6ICB4	259 aa	Predicted RBP	10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	OR5A2	Q8NGI9	324 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	NT5C	Q8TCD5	201 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	ASCL3	Q9NQ33	180 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	RPS4Y1	P22090	263 aa	Known RBP	10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	AANAT	Q16613	207 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	OR10D3	Q8NH80	312 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	PSG11	Q9UQ72	335 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	SLC22A13	Q9Y226	551 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	ATP6V1F	Q16864	119 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	COX20	Q5RI15	118 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	NEURL2	Q9BR09	285 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	RNASE1	P07998	156 aa	Known RBP	10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	ARNT	P27540	789 aa		10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	CDX1	P47902	265 aa	Predicted RBP	10.89	□□□□□ -0.67
ABCA2-223	ENST00000614293	GPR6	P46095	362 aa	Predicted RBP	10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	CEBPE	Q15744	281 aa		10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	ZNF429	Q86V71	674 aa		10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	EXTL1	Q92935	676 aa		10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	C16orf92	Q96LL3	132 aa		10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	C2orf50	Q96LR7	162 aa		10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	SLC25A33	Q9BSK2	321 aa		10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	CMC2	Q9NRP2	79 aa		10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	B3GNT9	Q6UX72	402 aa		10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	MYPOP	Q86VE0	399 aa	Predicted RBP	10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	PHYHIPL	Q96FC7	376 aa		10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	OR2D2	Q9H210	308 aa		10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	SEMG1	P04279	462 aa		10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	SPRED3	Q2MJR0	410 aa		10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	FAM53A	Q6NSI3	398 aa	Predicted RBP	10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	SNRNP40	Q96DI7	357 aa	Known RBP	10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	COX6C	P09669	75 aa		10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	RAG2	P55895	527 aa		10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	OR2W3	Q7Z3T1	314 aa		10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	NFAM1	Q8NET5	270 aa	Predicted RBP	10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	TEAD3	Q99594	435 aa		10.88	□□□□□ -0.67
ABCA2-223	ENST00000614293	PRSS2	P07478	247 aa		10.88	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms