RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 RNF144BQ7Z419 303 aa9.64□□□□□ -0.87
LINC00539-204ENST00000608957 PEG10Q86TG7 708 aaKnown RBP9.64□□□□□ -0.87
LINC00539-204ENST00000608957 OR4M1Q8NGD0 313 aa9.64□□□□□ -0.87
LINC00539-204ENST00000608957 HPSE2Q8WWQ2 592 aa9.64□□□□□ -0.87
LINC00539-204ENST00000608957 RFT1Q96AA3 541 aa9.64□□□□□ -0.87
LINC00539-204ENST00000608957 PPP1R3EQ9H7J1 279 aa9.64□□□□□ -0.87
LINC00539-204ENST00000608957 MMP26Q9NRE1 261 aa9.64□□□□□ -0.87
LINC00539-204ENST00000608957 RHBDL2Q9NX52 303 aa9.64□□□□□ -0.87
LINC00539-204ENST00000608957 MRPL15Q9P015 296 aaKnown RBP9.64□□□□□ -0.87
LINC00539-204ENST00000608957 MPC1Q9Y5U8 109 aa9.64□□□□□ -0.87
LINC00539-204ENST00000608957 FAM230AA0A1W2PPH8 454 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 CEACAM18A8MTB9 384 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 LDLRAD4O15165 306 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 VENTXO95231 258 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 FSHBP01225 129 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 UBBP0CG47 229 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 RAB6AP20340 208 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 CA6P23280 308 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 PTBP1P26599 531 aaKnown RBP eCLIP9.63□□□□□ -0.87
LINC00539-204ENST00000608957 CD200P41217 278 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 SRP9P49458 86 aaKnown RBP9.63□□□□□ -0.87
LINC00539-204ENST00000608957 ATP1B3P54709 279 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 MTCP1P56278 107 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 ZP1P60852 638 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 PLA2G7Q13093 441 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 IL18Q14116 193 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 MPPED2Q15777 294 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 ZNF79Q15937 498 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 CEACAM21Q3KPI0 293 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 DCAF12L2Q5VW00 463 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 GLIPR1L1Q6UWM5 242 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 BAIAP2L2Q6UXY1 529 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 C1QL2Q7Z5L3 287 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 ANGPTL5Q86XS5 388 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 CMTM4Q8IZR5 234 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 C19orf18Q8NEA5 215 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 OR5D18Q8NGL1 313 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 TNFAIP8L1Q8WVP5 186 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 RAB40AQ8WXH6 277 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 SOSTQ9BQB4 213 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 CCDC32Q9BV29 185 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 C19orf24Q9BVV8 132 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 SRRQ9GZT4 340 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 FGF23Q9GZV9 251 aaPredicted RBP9.63□□□□□ -0.87
LINC00539-204ENST00000608957 ABCG5Q9H222 651 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 TMEM165Q9HC07 324 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 PALMDQ9NP74 551 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 GHRLQ9UBU3 117 aa9.63□□□□□ -0.87
LINC00539-204ENST00000608957 POLR3KQ9Y2Y1 108 aaPredicted RBP9.63□□□□□ -0.87
LINC00539-204ENST00000608957 IGKV1-27A0A075B6S5 117 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 A0A0G2JMP0 313 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 A0A0X1KG70 313 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 PQLC2LA1A4F0 135 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 OR5B21A6NL26 309 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 A8MXK9 166 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 WNT2P09544 360 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 MDH2P40926 338 aaKnown RBP9.62□□□□□ -0.87
LINC00539-204ENST00000608957 PTGFRP43088 359 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 GATA4P43694 442 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 EFNB2P52799 333 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 QRFPP83859 136 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 PAX2Q02962 417 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 MADCAM1Q13477 382 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 ZNF181Q2M3W8 571 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 C16orf87Q6PH81 154 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 OR2W3Q7Z3T1 314 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 SPICQ8N5J4 248 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 DEFB108BQ8NET1 73 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 OR4M2Q8NGB6 313 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 Q8TCH9 128 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 OR5P3Q8WZ94 311 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 PTX4Q96A99 478 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 ITPKCQ96DU7 683 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 S100A16Q96FQ6 103 aaKnown RBP9.62□□□□□ -0.87
LINC00539-204ENST00000608957 C1orf147Q96MC9 270 aaPredicted RBP9.62□□□□□ -0.87
LINC00539-204ENST00000608957 HIST1H2AAQ96QV6 131 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 TMEM246Q9BRR3 403 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 ADAT1Q9BUB4 502 aaKnown RBP9.62□□□□□ -0.87
LINC00539-204ENST00000608957 UFSP2Q9NUQ7 469 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 FBLN5Q9UBX5 448 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 METRNQ9UJH8 293 aa9.62□□□□□ -0.87
LINC00539-204ENST00000608957 NOP16Q9Y3C1 178 aaKnown RBP9.62□□□□□ -0.87
LINC00539-204ENST00000608957 STAB1Q9NY15 2570 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 TMEM14DPA8MWL7 114 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 ZNF732B4DXR9 585 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 J3QLI3 93 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 IFNL4K9M1U5 179 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 TCF21O43680 179 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 FOXH1O75593 365 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 PTBP3O95758 552 aaKnown RBP9.61□□□□□ -0.87
LINC00539-204ENST00000608957 VSIG8P0DPA2 414 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 EPHA1P21709 976 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 PITPNBP48739 271 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 GNG3P63215 75 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 UNC119Q13432 240 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 OR8G1Q15617 311 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 PYDC2Q56P42 97 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 TMEM69Q5SWH9 247 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 OR10K2Q6IF99 312 aa9.61□□□□□ -0.87
LINC00539-204ENST00000608957 PYHIN1Q6K0P9 492 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms