RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 NEDD8Q15843 81 aa11.85□□□□□ -0.51
CTSA-211ENST00000606066 SSX1Q16384 188 aa11.85□□□□□ -0.51
CTSA-211ENST00000606066 CR1LQ2VPA4 569 aa11.85□□□□□ -0.51
CTSA-211ENST00000606066 SYT6Q5T7P8 510 aaPredicted RBP11.85□□□□□ -0.51
CTSA-211ENST00000606066 GLT8D1Q68CQ7 371 aa11.85□□□□□ -0.51
CTSA-211ENST00000606066 CRIP3Q6Q6R5 217 aa11.85□□□□□ -0.51
CTSA-211ENST00000606066 TMEM91Q6ZNR0 172 aa11.85□□□□□ -0.51
CTSA-211ENST00000606066 RNF144BQ7Z419 303 aa11.85□□□□□ -0.51
CTSA-211ENST00000606066 RAB40AQ8WXH6 277 aa11.85□□□□□ -0.51
CTSA-211ENST00000606066 TMEM158Q8WZ71 300 aa11.85□□□□□ -0.51
CTSA-211ENST00000606066 NR1H4Q96RI1 486 aaPredicted RBP11.85□□□□□ -0.51
CTSA-211ENST00000606066 UQCC2Q9BRT2 126 aa11.85□□□□□ -0.51
CTSA-211ENST00000606066 SHARPINQ9H0F6 387 aa11.85□□□□□ -0.51
CTSA-211ENST00000606066 METTL9Q9H1A3 318 aa11.85□□□□□ -0.51
CTSA-211ENST00000606066 HMG20AQ9NP66 347 aa11.85□□□□□ -0.51
CTSA-211ENST00000606066 SLC25A10Q9UBX3 287 aaPredicted RBP11.85□□□□□ -0.51
CTSA-211ENST00000606066 CDC42EP3Q9UKI2 254 aa11.85□□□□□ -0.51
CTSA-211ENST00000606066 ING4Q9UNL4 249 aa11.85□□□□□ -0.51
CTSA-211ENST00000606066 ENSAO43768 121 aaKnown RBP11.84□□□□□ -0.51
CTSA-211ENST00000606066 CSTBP04080 98 aaKnown RBP11.84□□□□□ -0.51
CTSA-211ENST00000606066 SFTPBP07988 381 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 OR3A4PP47883 348 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 CAPZA1P52907 286 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 CAV3P56539 151 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 GPR176Q14439 515 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 DGUOKQ16854 277 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 FAM120AOSQ5T036 256 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 FAM27D1Q5T7N8 215 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 ELP2Q6IA86 826 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 CD200R1LQ6Q8B3 271 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 ASCL4Q6XD76 172 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 BTN2A1Q7KYR7 527 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 CD177Q8N6Q3 437 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 ZNRF1Q8ND25 227 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 TMEM185AQ8NFB2 350 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 NUDT16L1Q9BRJ7 211 aaKnown RBP11.84□□□□□ -0.51
CTSA-211ENST00000606066 MRI1Q9BV20 369 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 BEX2Q9BXY8 128 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 FAM234AQ9H0X4 552 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 C7orf69Q9H7B7 122 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 MMP26Q9NRE1 261 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 GSTK1Q9Y2Q3 226 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 MAB21L2Q9Y586 359 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 INSIG2Q9Y5U4 225 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 ABCA1O95477 2261 aa11.84□□□□□ -0.51
CTSA-211ENST00000606066 IGHV2-70DA0A0C4DH43 119 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 KIR2DS1A0A191URI9 304 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 A0A1B0GW55 424 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 TRDV1A0A1B0GX56 115 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 MAGEA13PA6NCF6 341 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 SH2D1BO14796 132 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 HAND1O96004 215 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 DUX4L2P0CJ85 424 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 DUX4L3P0CJ86 424 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 DUX4L4P0CJ87 422 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 DUX4L5P0CJ88 424 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 DUX4L6P0CJ89 424 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 DUX4L7P0CJ90 424 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 NDUFB7P17568 137 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 CALRP27797 417 aaKnown RBP11.83□□□□□ -0.52
CTSA-211ENST00000606066 RANBP1P43487 201 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 PSMD7P51665 324 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 GP2P55259 537 aaKnown RBP11.83□□□□□ -0.52
CTSA-211ENST00000606066 FGF12P61328 243 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 DUX4L9Q6RFH8 374 aaPredicted RBP11.83□□□□□ -0.52
CTSA-211ENST00000606066 C1QL2Q7Z5L3 287 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 LRRTM1Q86UE6 522 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 PPP1R35Q8TAP8 253 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 DMRTB1Q96MA1 342 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 PPIL3Q9H2H8 161 aaKnown RBP11.83□□□□□ -0.52
CTSA-211ENST00000606066 CNTD2Q9H8S5 307 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 EXOSC4Q9NPD3 245 aaKnown RBP11.83□□□□□ -0.52
CTSA-211ENST00000606066 IL36GQ9NZH8 169 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 GHRLQ9UBU3 117 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 DUX4Q9UBX2 424 aa11.83□□□□□ -0.52
CTSA-211ENST00000606066 CDRT1O95170 752 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 HTR3BO95264 441 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 TFF1P04155 84 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 CALCBP10092 127 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 CEBPDP49716 269 aaPredicted RBP11.82□□□□□ -0.52
CTSA-211ENST00000606066 SNU13P55769 128 aaKnown RBP11.82□□□□□ -0.52
CTSA-211ENST00000606066 PAX2Q02962 417 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 COL10A1Q03692 680 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 CHRFAM7AQ494W8 412 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 AWAT2Q6E213 333 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 GLIPR1L1Q6UWM5 242 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 ASCC1Q8N9N2 400 aaKnown RBP11.82□□□□□ -0.52
CTSA-211ENST00000606066 Q8NFD4 153 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 OR5D13Q8NGL4 314 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 TBC1D15Q8TC07 691 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 H1FXQ92522 213 aaKnown RBP11.82□□□□□ -0.52
CTSA-211ENST00000606066 MUL1Q969V5 352 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 SNX22Q96L94 193 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 TMPRSS13Q9BYE2 586 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 RPUSD1Q9UJJ7 312 aaKnown RBP11.82□□□□□ -0.52
CTSA-211ENST00000606066 STUB1Q9UNE7 303 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 SSR3Q9UNL2 185 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 MRPS28Q9Y2Q9 187 aaKnown RBP11.82□□□□□ -0.52
CTSA-211ENST00000606066 AUP1Q9Y679 476 aa11.82□□□□□ -0.52
CTSA-211ENST00000606066 SVEP1Q4LDE5 3571 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms