RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 SLC46A1Q96NT5 459 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 TCFL5Q9UL49 500 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 NCOA6Q14686 2063 aaPredicted RBP10.85□□□□□ -0.67
CDCA3-212ENST00000604599 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 A0A1B0GU03 582 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 ALG1L2C9J202 215 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 HSPA12AO43301 675 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 TNFSF12O43508 249 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 DFFBO76075 338 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 CD55P08174 381 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 FCGR2AP12318 317 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 AKT2P31751 481 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 ALDH3B1P43353 468 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 RND2P52198 227 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 RUNX3Q13761 415 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 P2RY6Q15077 328 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 FAM90A2PQ658T7 463 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 LGI3Q8N145 548 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 ZNF283Q8N7M2 679 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 OR8G5Q8NG78 346 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 OR2AJ1Q8NGZ0 328 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 CDCA3Q99618 268 aaPredicted RBP10.85□□□□□ -0.67
CDCA3-212ENST00000604599 FAAP24Q9BTP7 215 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 GLRX2Q9NS18 164 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 LTBP2Q14767 1821 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 H3BML4 177 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 RRP8O43159 456 aaKnown RBP10.85□□□□□ -0.67
CDCA3-212ENST00000604599 CYB5R3P00387 301 aaPredicted RBP10.85□□□□□ -0.67
CDCA3-212ENST00000604599 OR1D4P47884 311 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 MFAP5Q13361 173 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 NECAP1Q8NC96 275 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 SSC4DQ8WTU2 575 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 DECR2Q9NUI1 292 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 DKKL1Q9UK85 242 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 XKRY2A2RUG3 117 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 NKX2-6A6NCS4 301 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 B4DEV8 164 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 PITX3O75364 302 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 PPM1FP49593 454 aaPredicted RBP10.84□□□□□ -0.67
CDCA3-212ENST00000604599 PPA1Q15181 289 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 MPV17LQ2QL34 196 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 COL13A1Q5TAT6 717 aaPredicted RBP10.84□□□□□ -0.67
CDCA3-212ENST00000604599 BRICD5Q6PL45 260 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 H1FNTQ75WM6 255 aaPredicted RBP10.84□□□□□ -0.67
CDCA3-212ENST00000604599 OR10A7Q8NGE5 316 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 OR4D5Q8NGN0 318 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 MOB1AQ9H8S9 216 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 CDH20Q9HBT6 801 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 SEMA4FO95754 770 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 APODP05090 189 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 FAHP16930 419 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 DYNLT3P51808 116 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 NUBP1P53384 320 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 RSPO4Q2I0M5 234 aaPredicted RBP10.84□□□□□ -0.67
CDCA3-212ENST00000604599 CARD17Q5XLA6 110 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 HLA-DQA1Q5Y7H0 255 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 C20orf196Q8IYI0 205 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 TMEM252Q8N6L7 170 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 RBMXL1Q96E39 390 aaKnown RBP10.84□□□□□ -0.67
CDCA3-212ENST00000604599 TP53RKQ96S44 253 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 LRFN1Q9P244 771 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 VDAC3Q9Y277 283 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 PIAS3Q9Y6X2 628 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 PTPRSQ13332 1948 aa10.84□□□□□ -0.67
CDCA3-212ENST00000604599 CHD9Q3L8U1 2897 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 TRBV24-1A0A075B6N3 115 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 LOC102723971A0A1B0GUV8 181 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 SHISA8B8ZZ34 492 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 IFNL4K9M1U5 179 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 LBX1P52954 281 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 TFF2Q03403 129 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 ZFP36L1Q07352 338 aaKnown RBP10.83□□□□□ -0.68
CDCA3-212ENST00000604599 CLEC12BQ2HXU8 276 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 DOK3Q7L591 496 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 C9orf40Q8IXQ3 194 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 GPR137CQ8N3F9 429 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 HIST1H2AAQ96QV6 131 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 NECAP2Q9NVZ3 263 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 TBX21Q9UL17 535 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 MMACHCQ9Y4U1 282 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 MARCH11A6NNE9 402 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 TGOLN2O43493 480 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 OPN1LWP04000 364 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 NKX2-1P43699 371 aaPredicted RBP10.83□□□□□ -0.68
CDCA3-212ENST00000604599 TLE4Q04727 773 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 FOXF1Q12946 379 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 ARL6IP1Q15041 203 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 C1orf189Q5VU69 101 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 PRSS58Q8IYP2 241 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 LRTM2Q8N967 370 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 OIT3Q8WWZ8 545 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 WFIKKN1Q96NZ8 548 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 NKX2-4Q9H2Z4 354 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 ZNF665Q9H7R5 613 aa10.83□□□□□ -0.68
CDCA3-212ENST00000604599 CHD3Q12873 2000 aaKnown RBP10.83□□□□□ -0.68
CDCA3-212ENST00000604599 PROB1E7EW31 1015 aa10.82□□□□□ -0.68
CDCA3-212ENST00000604599 ANGPTL7O43827 346 aa10.82□□□□□ -0.68
CDCA3-212ENST00000604599 PCP4P48539 62 aa10.82□□□□□ -0.68
CDCA3-212ENST00000604599 GABREP78334 506 aa10.82□□□□□ -0.68
CDCA3-212ENST00000604599 PAX5Q02548 391 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms