RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 METTL15A6NJ78 407 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 RFPL4AA6NLU0 287 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 RFPL4AL1F8VTS6 287 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 J3QT63 122 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 GPR37O15354 613 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 OR2T7P0C7T2 308 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 ATP6V1E1P36543 226 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 CAPZA1P52907 286 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 BDH1Q02338 343 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 TP53I3Q53FA7 332 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 SHISA2Q6UWI4 295 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 ACP7Q6ZNF0 438 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 CATSPERDQ86XM0 798 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 CMTM4Q8IZR5 234 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 FAM185AQ8N0U4 392 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 PRSS35Q8N3Z0 413 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 CD177Q8N6Q3 437 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 KIR3DL3Q8N743 410 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 POC1AQ8NBT0 407 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 OR2T27Q8NH04 317 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 SGMS2Q8NHU3 365 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 BORCS5Q969J3 196 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 OR51E2Q9H255 320 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 C19orf12Q9NSK7 152 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 C1RLQ9NZP8 487 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 STUB1Q9UNE7 303 aa11.28□□□□□ -0.6
SCAF1-203ENST00000598359 FAM230AA0A1W2PPH8 454 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 HSMCR30P0CW71 290 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 PGA5P0DJD9 388 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 KIR3DL2P43630 455 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 RAG2P55895 527 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 CAV3P56539 151 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 LSM3P62310 102 aaKnown RBP11.27□□□□□ -0.61
SCAF1-203ENST00000598359 ZNF85Q03923 595 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 PDLIM3Q53GG5 364 aaPredicted RBP11.27□□□□□ -0.61
SCAF1-203ENST00000598359 CALHM1Q8IU99 346 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 RDH10Q8IZV5 341 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 OR6Q1Q8NGQ2 317 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 SSMEM1Q8WWF3 244 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 S100ZQ8WXG8 99 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 TNFRSF14Q92956 283 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 RNF166Q96A37 237 aaPredicted RBP11.27□□□□□ -0.61
SCAF1-203ENST00000598359 SDSLQ96GA7 329 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 AKIP1Q9NQ31 210 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 ERVK13-1Q9NX77 482 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 OR14J1Q9UGF5 321 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 GNG8Q9UK08 70 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 FAM96BQ9Y3D0 163 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 TRRAPQ9Y4A5 3859 aa11.27□□□□□ -0.61
SCAF1-203ENST00000598359 IGKV1-27A0A075B6S5 117 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 ANKRD61A6NGH8 418 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 NPFFO15130 113 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 SYT7O43581 403 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 GPR137BO60478 399 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 GPX5O75715 221 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 NXPH2O95156 264 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 CRYBA1P05813 215 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 CCL1P22362 96 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 PRDX2P32119 198 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 IER3P46695 156 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 BMXP51813 675 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 ERVFRD-1P60508 538 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 UBE2V2Q15819 145 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 SMIM21Q3B7S5 101 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 CD200R1LQ6Q8B3 271 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 Q6ZSR3 168 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 ZNF573Q86YE8 665 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 TMEM86BQ8N661 226 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 OR4M1Q8NGD0 313 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 C17orf50Q8WW18 174 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 NRIP2Q9BQI9 281 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 CHCHD6Q9BRQ6 235 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 CENPOQ9BU64 300 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 MMP27Q9H306 513 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 PLEKHA1Q9HB21 404 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 RASL12Q9NYN1 266 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 CAB39Q9Y376 341 aaPredicted RBP11.26□□□□□ -0.61
SCAF1-203ENST00000598359 SF3B6Q9Y3B4 125 aaKnown RBP11.26□□□□□ -0.61
SCAF1-203ENST00000598359 POMT1Q9Y6A1 747 aa11.26□□□□□ -0.61
SCAF1-203ENST00000598359 LOC107986453A0A1B0GWG9 222 aa11.25□□□□□ -0.61
SCAF1-203ENST00000598359 MEX3AA1L020 520 aaKnown RBP11.25□□□□□ -0.61
SCAF1-203ENST00000598359 MEIOCA2RUB1 952 aa11.25□□□□□ -0.61
SCAF1-203ENST00000598359 F8VVB4 439 aa11.25□□□□□ -0.61
SCAF1-203ENST00000598359 F8VWA3 439 aa11.25□□□□□ -0.61
SCAF1-203ENST00000598359 PSMA1P25786 263 aaKnown RBP11.25□□□□□ -0.61
SCAF1-203ENST00000598359 PAX6P26367 422 aa11.25□□□□□ -0.61
SCAF1-203ENST00000598359 SAA4P35542 130 aa11.25□□□□□ -0.61
SCAF1-203ENST00000598359 TGFBR1P36897 503 aa11.25□□□□□ -0.61
SCAF1-203ENST00000598359 ZNF846Q147U1 533 aa11.25□□□□□ -0.61
SCAF1-203ENST00000598359 TAF9Q16594 264 aa11.25□□□□□ -0.61
SCAF1-203ENST00000598359 OR2G6Q5TZ20 316 aa11.25□□□□□ -0.61
SCAF1-203ENST00000598359 HCP5Q6MZN7 132 aa11.25□□□□□ -0.61
SCAF1-203ENST00000598359 METAP1DQ6UB28 335 aaPredicted RBP11.25□□□□□ -0.61
SCAF1-203ENST00000598359 LDLRAD3Q86YD5 345 aa11.25□□□□□ -0.61
SCAF1-203ENST00000598359 ACBD7Q8N6N7 88 aa11.25□□□□□ -0.61
SCAF1-203ENST00000598359 ITFG2Q969R8 447 aa11.25□□□□□ -0.61
SCAF1-203ENST00000598359 WDR12Q9GZL7 423 aaKnown RBP11.25□□□□□ -0.61
SCAF1-203ENST00000598359 DHRS7CA6NNS2 312 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 POM121CA8CG34 1229 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 M0R1W7 72 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms