RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 ABHD1Q96SE0 405 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 SMR3AQ99954 134 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 NICN1Q9BSH3 213 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 CCDC32Q9BV29 185 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 RBFOX1Q9NWB1 397 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 H3BUI4 141 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 RAB27BO00194 218 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 CTDSPLO15194 276 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 NOS1APO75052 506 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 NXPH2O95156 264 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 PTBP3O95758 552 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 PGA5P0DJD9 388 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 IRF2P14316 349 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 PTH2RP49190 550 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 INPP1P49441 399 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 SNU13P55769 128 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 MRPS10P82664 201 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 ARL6IP1Q15041 203 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 TAF9Q16594 264 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 ZNF181Q2M3W8 571 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 PCGF3Q3KNV8 242 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 FAM209AQ5JX71 171 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 FIP1L1Q6UN15 594 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 Q8N402 240 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 OR11L1Q8NGX0 322 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 LRRC29Q8WV35 223 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 FCAMRQ8WWV6 532 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 Q96M66 194 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 NEDD4LQ96PU5 975 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 NUDT16L1Q9BRJ7 211 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 THAP7Q9BT49 309 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 AUNIPQ9H7T9 357 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 ABCB10Q9NRK6 738 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 CBLN4Q9NTU7 201 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 GLS2Q9UI32 602 aa11.03□□□□□ -0.64
SHKBP1-209ENST00000595803 A0A0A6YYD4 124 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 FAM90A10PA6NDY2 464 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 FAM90A18PA6NE21 464 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 FAM90A16PA6NEW6 464 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 FAM90A20PA6NIJ5 464 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 FAM90A8PA6NJQ4 464 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 FAM90A7PA6NKC0 464 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 FAM90A22PA8MWA6 464 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 FAM90A12PA8MX19 464 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 FAM90A5PA8MXJ8 464 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 FAM90A23PA8MXZ1 464 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 F8VVB4 439 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 F8VWA3 439 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 UPK1BO75841 260 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 FAM90A15PP0C7V4 464 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 FAM90A13PP0C7W8 464 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 FAM90A14PP0C7W9 464 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 FAM90A24PP0C7X0 464 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 GLRA1P23415 457 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 PRSS3P35030 304 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 GATA4P43694 442 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 RBM11P57052 281 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 GMFBP60983 142 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 ERVK11-1P61568 191 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 CCL8P80075 99 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 SCN1BQ07699 218 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 PIGYQ3MUY2 71 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 ZNF260Q3ZCT1 412 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 SPRNQ5BIV9 151 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 TRIQKQ629K1 86 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 WDR82Q6UXN9 313 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 ZCCHC24Q8N2G6 241 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 BOLLQ8N9W6 283 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 C19orf18Q8NEA5 215 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 SDHCQ99643 169 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 VRK1Q99986 396 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 NRIP2Q9BQI9 281 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 ZMAT3Q9HA38 289 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 UBTD1Q9HAC8 227 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 PALMDQ9NP74 551 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 PLEKHJ1Q9NW61 149 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 RASL12Q9NYN1 266 aa11.02□□□□□ -0.65
SHKBP1-209ENST00000595803 GABARAPH6UMI1 98 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 SULT1C2O00338 296 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 GEMIN2O14893 280 aaKnown RBP11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 DEGS1O15121 323 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 GSTZ1O43708 216 aaPredicted RBP11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 GSTP1P09211 210 aaKnown RBP11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 GNB3P16520 340 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 CFHR2P36980 270 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 PMELP40967 661 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 TMEM50BP56557 158 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 IL13RA2Q14627 380 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 PDCD1Q15116 288 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 BAK1Q16611 211 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 PNLIPRP3Q17RR3 467 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 MPV17LQ2QL34 196 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 RNASE12Q5GAN4 147 aaKnown RBP11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 NHLRC3Q5JS37 347 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 NKAPLQ5M9Q1 402 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 ATAD3CQ5T2N8 411 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 LINC00596Q86U02 117 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 HPS1Q92902 700 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 ARHGAP5-AS1Q96IT6 56 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 PECRQ9BY49 303 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms