RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 SEBOXQ9HB31 216 aaPredicted RBP18.78■□□□□ 0.6
SNRNP70-204ENST00000595231 OR14J1Q9UGF5 321 aa18.78■□□□□ 0.6
SNRNP70-204ENST00000595231 MAB21L2Q9Y586 359 aa18.78■□□□□ 0.6
SNRNP70-204ENST00000595231 HIVEP1P15822 2718 aa18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 NOTOA8MTQ0 251 aa18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 AIPO00170 330 aa18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 CSTBP04080 98 aaKnown RBP18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 UBBP0CG47 229 aa18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 VSIG8P0DPA2 414 aa18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 RPS2P15880 293 aaKnown RBP18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 BMXP51813 675 aa18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 SNU13P55769 128 aaKnown RBP18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 P2RY14Q15391 338 aa18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 RAB11BQ15907 218 aa18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 SPIN3Q5JUX0 258 aa18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 FAM216BQ8N7L0 139 aa18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 NEIL1Q96FI4 390 aaPredicted RBP18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 SDSLQ96GA7 329 aa18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 C1orf159Q96HA4 380 aa18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 STEAP1Q9UHE8 339 aa18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 METRNQ9UJH8 293 aa18.77■□□□□ 0.6
SNRNP70-204ENST00000595231 DOCK11Q5JSL3 2073 aa18.77■□□□□ 0.59
SNRNP70-204ENST00000595231 FAM157AC9JC47 383 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 SMAD7O15105 426 aaKnown RBP18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 CPT2P23786 658 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 GABRA2P47869 451 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 BLMHQ13867 455 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 TMEM249Q2WGJ8 235 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 PIGYQ3MUY2 71 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 OSR2Q8N2R0 312 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 OR51D1Q8NGF3 324 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 RAB39BQ96DA2 213 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 TMUB1Q9BVT8 246 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 KCNK15Q9H427 330 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 PCDHB16Q9NRJ7 776 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 MALRD1Q5VYJ5 2156 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 SIGLEC5O15389 551 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 BPNT1O95861 308 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 IL1AP01583 271 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 SLC2A2P11168 524 aaPredicted RBP18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 GTF2F2P13984 249 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 SELLP14151 372 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 ARSBP15848 533 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 TMBIM6P55061 237 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 NHLRC3Q5JS37 347 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 OR10K2Q6IF99 312 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 SFXN4Q6P4A7 337 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 FIP1L1Q6UN15 594 aaKnown RBP18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 SLC36A1Q7Z2H8 476 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 ZNRF1Q8ND25 227 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 FAM3DQ96BQ1 224 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 BANF2Q9H503 90 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 ST3GAL6Q9Y274 331 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 CEPT1Q9Y6K0 416 aa18.76■□□□□ 0.59
SNRNP70-204ENST00000595231 HAND1O96004 215 aa18.75■□□□□ 0.59
SNRNP70-204ENST00000595231 UNC119Q13432 240 aa18.75■□□□□ 0.59
SNRNP70-204ENST00000595231 C2orf76Q3KRA6 126 aa18.75■□□□□ 0.59
SNRNP70-204ENST00000595231 Q6P435 159 aa18.75■□□□□ 0.59
SNRNP70-204ENST00000595231 NLRC3Q7RTR2 1065 aa18.75■□□□□ 0.59
SNRNP70-204ENST00000595231 OR8B3Q8NGG8 313 aa18.75■□□□□ 0.59
SNRNP70-204ENST00000595231 RAB2BQ8WUD1 216 aa18.75■□□□□ 0.59
SNRNP70-204ENST00000595231 MRPS24Q96EL2 167 aaKnown RBP18.75■□□□□ 0.59
SNRNP70-204ENST00000595231 OR8B2Q96RD0 313 aa18.75■□□□□ 0.59
SNRNP70-204ENST00000595231 TMEM14DPA8MWL7 114 aa18.74■□□□□ 0.59
SNRNP70-204ENST00000595231 DVL1O14640 695 aa18.74■□□□□ 0.59
SNRNP70-204ENST00000595231 HEXAP06865 529 aa18.74■□□□□ 0.59
SNRNP70-204ENST00000595231 MGMTP16455 207 aa18.74■□□□□ 0.59
SNRNP70-204ENST00000595231 SERPINB10P48595 397 aa18.74■□□□□ 0.59
SNRNP70-204ENST00000595231 RBM11P57052 281 aaKnown RBP18.74■□□□□ 0.59
SNRNP70-204ENST00000595231 IL13RA1P78552 427 aa18.74■□□□□ 0.59
SNRNP70-204ENST00000595231 COL10A1Q03692 680 aa18.74■□□□□ 0.59
SNRNP70-204ENST00000595231 PDCD1Q15116 288 aa18.74■□□□□ 0.59
SNRNP70-204ENST00000595231 FGFRL1Q8N441 504 aa18.74■□□□□ 0.59
SNRNP70-204ENST00000595231 FAM46BQ96A09 425 aa18.74■□□□□ 0.59
SNRNP70-204ENST00000595231 MED30Q96HR3 178 aa18.74■□□□□ 0.59
SNRNP70-204ENST00000595231 C18orf12Q96KH6 178 aa18.74■□□□□ 0.59
SNRNP70-204ENST00000595231 LIN7BQ9HAP6 207 aa18.74■□□□□ 0.59
SNRNP70-204ENST00000595231 ARHGAP32A7KAX9 2087 aa18.74■□□□□ 0.59
SNRNP70-204ENST00000595231 A0A0B4J203 849 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 SH2D1BO14796 132 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 LDLRAD4O15165 306 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 CRTAPO75718 401 aaPredicted RBP18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 CHRM2P08172 466 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 IGHV4-31P0DP07 118 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 LMO1P25800 156 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 ZFP36P26651 326 aaKnown RBP18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 PITPNBP48739 271 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 CAPZA1P52907 286 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 IKZF1Q13422 519 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 ZNF561Q8N587 486 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 KCNG3Q8TAE7 436 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 NDNFQ8TB73 568 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 RBM38Q9H0Z9 239 aaKnown RBP18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 CST11Q9H112 138 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 ZNF581Q9P0T4 197 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 DAPK2Q9UIK4 370 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 NKX6-3A6NJ46 265 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 GEMIN2O14893 280 aaKnown RBP18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 PHF1O43189 567 aaPredicted RBP18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 ZNF737O75373 536 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms