RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 SYNGR1O43759 233 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 RAMP1O60894 148 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 CLDN11O75508 207 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 EEDO75530 441 aaKnown RBP3.72□□□□□ -1.81
SMAD4-216ENST00000593223 VENTXO95231 258 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 TDP2O95551 362 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 ATP6V1G2O95670 118 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 LSM8O95777 96 aaKnown RBP3.72□□□□□ -1.81
SMAD4-216ENST00000593223 JCHAINP01591 159 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 MT-ND4P03905 459 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 CATP04040 527 aaKnown RBP3.72□□□□□ -1.81
SMAD4-216ENST00000593223 ZNF806P0C7X5 589 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 LIMS3P0CW19 117 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 LIMS4P0CW20 117 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 TDGF1P13385 188 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 IGFBP3P17936 291 aaPredicted RBP3.72□□□□□ -1.81
SMAD4-216ENST00000593223 F8A1P23610 371 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 HTR1DP28221 377 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 HTR1FP30939 366 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 TFPI2P48307 235 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 GSSP48637 474 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 HCAR3P49019 387 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 FGF8P55075 233 aaPredicted RBP3.72□□□□□ -1.81
SMAD4-216ENST00000593223 KRTAP10-3P60369 221 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 UNC119Q13432 240 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 OR5I1Q13606 314 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 LAGE3Q14657 143 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 PSMD5Q16401 504 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 TBC1D28Q2M2D7 210 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 FAM199XQ6PEV8 388 aaPredicted RBP3.72□□□□□ -1.81
SMAD4-216ENST00000593223 CYHR1Q6ZMK1 362 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 IDO2Q6ZQW0 420 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 Q6ZT83 130 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 SH2D6Q7Z4S9 175 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 S100A7AQ86SG5 101 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 RALGPS2Q86X27 583 aaPredicted RBP3.72□□□□□ -1.81
SMAD4-216ENST00000593223 DHFR2Q86XF0 187 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 ZNF584Q8IVC4 421 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 VKORC1L1Q8N0U8 176 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 CA13Q8N1Q1 262 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 LINC01561Q8N1V8 128 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 MREGQ8N565 214 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 ZNF561Q8N587 486 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 METTL13Q8N6R0 699 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 UBL4BQ8N7F7 174 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 ATP6V0D2Q8N8Y2 350 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 HSD17B11Q8NBQ5 300 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 DUSP18Q8NEJ0 188 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 OR11H1Q8NG94 326 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 OR6T1Q8NGN1 323 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 OR10X1Q8NGY0 326 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 OR11H2Q8NH07 326 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 SLC7A13Q8TCU3 470 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 C16orf78Q8WTQ4 265 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 KCTD4Q8WVF5 259 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 IL1F10Q8WWZ1 152 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 SFRP2Q96HF1 295 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 FAM210BQ96KR6 192 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 QKIQ96PU8 341 aaKnown RBP eCLIP3.72□□□□□ -1.81
SMAD4-216ENST00000593223 OR5B12Q96R08 314 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 YTHDF1Q9BYJ9 559 aaKnown RBP3.72□□□□□ -1.81
SMAD4-216ENST00000593223 GLIPR2Q9H4G4 154 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 PRORYQ9H606 182 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 B3GNT2Q9NY97 397 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 TAS2R1Q9NYW7 299 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 SLC25A37Q9NYZ2 338 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 TREM2Q9NZC2 230 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 DHRS4-AS1Q9P1J3 65 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 SEC14L4Q9UDX3 406 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 FBXO5Q9UKT4 447 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 ASF1AQ9Y294 204 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 ABCA2Q9BZC7 2435 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 PATJQ8NI35 1801 aa3.72□□□□□ -1.81
SMAD4-216ENST00000593223 MICAL3Q7RTP6 2002 aa3.71□□□□□ -1.81
SMAD4-216ENST00000593223 ZNF816-ZNF321PA0A0X1KG74 233 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 SPAARA0A1B0GVQ0 90 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 LYRM9A8MSI8 78 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 F5H5T6 163 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 TSTD3H0UI37 97 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 ZNF593O00488 134 aaPredicted RBP3.71□□□□□ -1.82
SMAD4-216ENST00000593223 SLC31A2O15432 143 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 CST8O60676 142 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 MED6O75586 246 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 KBTBD11O94819 623 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 THY1P04216 161 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 LGALS2P05162 132 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 FGF1P05230 155 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 WNT2P09544 360 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 SERPINA2P20848 420 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 TTPAP49638 278 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 ERFP50548 548 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 TAS2R31P59538 309 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 ST3GAL4Q11206 333 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 PRPSAP1Q14558 356 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 RAB35Q15286 201 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 CEACAM21Q3KPI0 293 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 OR10J3Q5JRS4 329 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 ATAD3CQ5T2N8 411 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 OR8G2PQ6IF36 304 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 C5orf46Q6UWT4 87 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms