RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 GLS2Q9UI32 602 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 ST3GAL6Q9Y274 331 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 IGKV1D-17A0A075B6S4 117 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 RFPL4AA6NLU0 287 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 RFPL4AL1F8VTS6 287 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 NDUFA2O43678 99 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 DUSP1P28562 367 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 PRDX2P32119 198 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 GABRA2P47869 451 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 RPS27AP62979 156 aaKnown RBP12.69□□□□□ -0.38
ATG4D-211ENST00000589753 IL13RA2Q14627 380 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 DCDC5Q6ZRR9 648 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 SPICQ8N5J4 248 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 ANGPTL6Q8NI99 470 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 ACOT12Q8WYK0 555 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 GAL3ST1Q99999 423 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 DCUN1D5Q9BTE7 237 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 URM1Q9BTM9 101 aaKnown RBP12.69□□□□□ -0.38
ATG4D-211ENST00000589753 DNTTIP1Q9H147 329 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 NARFLQ9H6Q4 476 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 ZNF222Q9UK12 451 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 RAB22AQ9UL26 194 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 ETV7Q9Y603 341 aa12.69□□□□□ -0.38
ATG4D-211ENST00000589753 ANKRD17O75179 2603 aaKnown RBP12.68□□□□□ -0.38
ATG4D-211ENST00000589753 NKX6-3A6NJ46 265 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 CEACAM18A8MTB9 384 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 SH2D1BO14796 132 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 TNFRSF13BO14836 293 aaPredicted RBP12.68□□□□□ -0.38
ATG4D-211ENST00000589753 HAND1O96004 215 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 TFF1P04155 84 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 RAB6AP20340 208 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 CEBPDP49716 269 aaPredicted RBP12.68□□□□□ -0.38
ATG4D-211ENST00000589753 PLA2G7Q13093 441 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 DYNC1I2Q13409 638 aaKnown RBP12.68□□□□□ -0.38
ATG4D-211ENST00000589753 ATPAF1Q5TC12 328 aaPredicted RBP12.68□□□□□ -0.38
ATG4D-211ENST00000589753 LINC00596Q86U02 117 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 CD177Q8N6Q3 437 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 OR5H6Q8NGV6 325 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 PTX4Q96A99 478 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 Q96M66 194 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 Q96MF0 132 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 CCL13Q99616 98 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 ZNF665Q9H7R5 613 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 SEBOXQ9HB31 216 aaPredicted RBP12.68□□□□□ -0.38
ATG4D-211ENST00000589753 ITGB1BP2Q9UKP3 347 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 SPATA2Q9UM82 520 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 PCDHB10Q9UN67 800 aa12.68□□□□□ -0.38
ATG4D-211ENST00000589753 PDZD2O15018 2839 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 GEMIN2O14893 280 aaKnown RBP12.67□□□□□ -0.38
ATG4D-211ENST00000589753 DEGS1O15121 323 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 TMPRSS2O15393 492 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 ADAM20O43506 726 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 CHRM2P08172 466 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 AMY2BP19961 511 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 CPT2P23786 658 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 GABRR1P24046 479 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 EFNB2P52799 333 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 SCN1BQ07699 218 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 IKZF1Q13422 519 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 PDCD1Q15116 288 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 FAM189A2Q15884 450 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 TAF9Q16594 264 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 MPV17LQ2QL34 196 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 MZT2AQ6P582 158 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 LYPD2Q6UXB3 125 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 ZNF788Q6ZQV5 615 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 SLC36A1Q7Z2H8 476 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 SDSLQ96GA7 329 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 POM121Q96HA1 1249 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 GAFA1Q96PS6 74 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 TM2D1Q9BX74 207 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 LPAR5Q9H1C0 372 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 COMMD3Q9UBI1 195 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 KAAG1Q9UBP8 84 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 MIOXQ9UGB7 285 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 POLQO75417 2590 aa12.67□□□□□ -0.38
ATG4D-211ENST00000589753 FAM90A10PA6NDY2 464 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 FAM90A18PA6NE21 464 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 FAM90A16PA6NEW6 464 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 FAM90A20PA6NIJ5 464 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 FAM90A8PA6NJQ4 464 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 FAM90A7PA6NKC0 464 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 CYSRT1A8MQ03 144 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 FAM90A22PA8MWA6 464 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 FAM90A12PA8MX19 464 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 FAM90A5PA8MXJ8 464 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 FAM90A23PA8MXZ1 464 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 SIRPB1O00241 398 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 OR7C1O76099 320 aaPredicted RBP12.66□□□□□ -0.38
ATG4D-211ENST00000589753 OR2H2O95918 312 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 FAM90A15PP0C7V4 464 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 FAM90A13PP0C7W8 464 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 FAM90A14PP0C7W9 464 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 FAM90A24PP0C7X0 464 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 ZNF44P15621 663 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 RPS2P15880 293 aaKnown RBP12.66□□□□□ -0.38
ATG4D-211ENST00000589753 IL13RA1P78552 427 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 COL10A1Q03692 680 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 Q6P435 159 aa12.66□□□□□ -0.38
ATG4D-211ENST00000589753 METAP1DQ6UB28 335 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms