RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 NKPD1Q17RQ9 610 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 OR2W3Q7Z3T1 314 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 C1orf162Q8NEQ5 155 aaPredicted RBP17.4■□□□□ 0.38
SMG8-203ENST00000578922 C1orf147Q96MC9 270 aaPredicted RBP17.4■□□□□ 0.38
SMG8-203ENST00000578922 PAPOLGQ9BWT3 736 aaKnown RBP17.4■□□□□ 0.38
SMG8-203ENST00000578922 CDH20Q9HBT6 801 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 TUBD1Q9UJT1 453 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 IGKV1-27A0A075B6S5 117 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 TMEM14DPA8MWL7 114 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 CRTAPO75718 401 aaPredicted RBP17.4■□□□□ 0.38
SMG8-203ENST00000578922 TAS2R31P59538 309 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 IL13RA1P78552 427 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 P2RY6Q15077 328 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 CNN3Q15417 329 aaKnown RBP17.4■□□□□ 0.38
SMG8-203ENST00000578922 FAM189A2Q15884 450 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 OR10R2Q8NGX6 335 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 VRK1Q99986 396 aaPredicted RBP17.4■□□□□ 0.38
SMG8-203ENST00000578922 NICN1Q9BSH3 213 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 CST11Q9H112 138 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 ZNF629Q9UEG4 869 aaPredicted RBP17.4■□□□□ 0.38
SMG8-203ENST00000578922 EEF1E1-BLOC1S5C9J1V9 151 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 LGALS8O00214 317 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 IFNA6P05013 189 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 CSN2P05814 226 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 PPP1R1AQ13522 171 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 EIF2S3LQ2VIR3 472 aaKnown RBP17.39■□□□□ 0.37
SMG8-203ENST00000578922 TMEM42Q69YG0 159 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 PPP1R1CQ8WVI7 109 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 FAM122AQ96E09 287 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 SFXN3Q9BWM7 321 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 TSPAN4O14817 238 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 SPRY1O43609 319 aaPredicted RBP17.39■□□□□ 0.37
SMG8-203ENST00000578922 ERVS71-1P61550 626 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 C17orf107Q6ZR85 190 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 RTN4RL2Q86UN3 420 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 STPG2Q8N412 459 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 THAP6Q8TBB0 222 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 MRGPRFQ96AM1 343 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 SPSB1Q96BD6 273 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 MRPS24Q96EL2 167 aaKnown RBP17.39■□□□□ 0.37
SMG8-203ENST00000578922 BORCS8Q96FH0 119 aa17.39■□□□□ 0.37
SMG8-203ENST00000578922 A0A0G2JNJ9 132 aa17.38■□□□□ 0.37
SMG8-203ENST00000578922 ANGPTL7O43827 346 aa17.38■□□□□ 0.37
SMG8-203ENST00000578922 DUS4LO95620 317 aaKnown RBP17.38■□□□□ 0.37
SMG8-203ENST00000578922 GSTP1P09211 210 aaKnown RBP17.38■□□□□ 0.37
SMG8-203ENST00000578922 TMEM225BP0DP42 221 aa17.38■□□□□ 0.37
SMG8-203ENST00000578922 CBR1P16152 277 aa17.38■□□□□ 0.37
SMG8-203ENST00000578922 ATF4P18848 351 aaPredicted RBP17.38■□□□□ 0.37
SMG8-203ENST00000578922 SERPINA2P20848 420 aa17.38■□□□□ 0.37
SMG8-203ENST00000578922 TMEM17Q86X19 198 aa17.38■□□□□ 0.37
SMG8-203ENST00000578922 S100A13Q99584 98 aa17.38■□□□□ 0.37
SMG8-203ENST00000578922 Q9UFV3 132 aa17.38■□□□□ 0.37
SMG8-203ENST00000578922 MED19A0JLT2 244 aaPredicted RBP17.38■□□□□ 0.37
SMG8-203ENST00000578922 RNF222A6NCQ9 220 aa17.38■□□□□ 0.37
SMG8-203ENST00000578922 TRIM77I1YAP6 450 aa17.38■□□□□ 0.37
SMG8-203ENST00000578922 CDC14BO60729 498 aa17.38■□□□□ 0.37
SMG8-203ENST00000578922 HRH1P35367 487 aa17.38■□□□□ 0.37
SMG8-203ENST00000578922 MRPL49Q13405 166 aaKnown RBP17.38■□□□□ 0.37
SMG8-203ENST00000578922 ACTBL2Q562R1 376 aa17.38■□□□□ 0.37
SMG8-203ENST00000578922 BARX1Q9HBU1 254 aaPredicted RBP17.38■□□□□ 0.37
SMG8-203ENST00000578922 ANAPC10Q9UM13 185 aa17.38■□□□□ 0.37
SMG8-203ENST00000578922 OR5H1A6NKK0 313 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 SMPD2O60906 423 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 LILRA1O75019 489 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 HOXB1P14653 301 aaPredicted RBP17.37■□□□□ 0.37
SMG8-203ENST00000578922 NAT1P18440 290 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 RBP2P50120 134 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 KLRB1Q12918 225 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 PRDX4Q13162 271 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 ZNF273Q14593 569 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 OR2T2Q6IF00 324 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 GVQW1Q8N7I0 195 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 INO80EQ8NBZ0 244 aaPredicted RBP17.37■□□□□ 0.37
SMG8-203ENST00000578922 RELL2Q8NC24 303 aaPredicted RBP17.37■□□□□ 0.37
SMG8-203ENST00000578922 NUDCD2Q8WVJ2 157 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 S100PBPQ96BU1 408 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 CYYR1Q96J86 154 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 SELENOIQ9C0D9 397 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 C12orf4Q9NQ89 552 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 SLC7A11Q9UPY5 501 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 ZNF835Q9Y2P0 537 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 PCNX1Q96RV3 2341 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 NBEAQ8NFP9 2946 aa17.37■□□□□ 0.37
SMG8-203ENST00000578922 TPRP12270 2363 aaKnown RBP17.37■□□□□ 0.37
SMG8-203ENST00000578922 CD300LBA8K4G0 201 aa17.36■□□□□ 0.37
SMG8-203ENST00000578922 IGKV3-15P01624 115 aa17.36■□□□□ 0.37
SMG8-203ENST00000578922 LUMP51884 338 aaPredicted RBP17.36■□□□□ 0.37
SMG8-203ENST00000578922 ATP1B3P54709 279 aa17.36■□□□□ 0.37
SMG8-203ENST00000578922 OR52W1Q6IF63 320 aa17.36■□□□□ 0.37
SMG8-203ENST00000578922 OR5L1Q8NGL2 311 aa17.36■□□□□ 0.37
SMG8-203ENST00000578922 KCNG3Q8TAE7 436 aa17.36■□□□□ 0.37
SMG8-203ENST00000578922 SEC22AQ96IW7 307 aa17.36■□□□□ 0.37
SMG8-203ENST00000578922 TMEM59Q9BXS4 323 aa17.36■□□□□ 0.37
SMG8-203ENST00000578922 OR2J1Q9GZK6 312 aa17.36■□□□□ 0.37
SMG8-203ENST00000578922 LPAR5Q9H1C0 372 aa17.36■□□□□ 0.37
SMG8-203ENST00000578922 WDR13Q9H1Z4 485 aa17.36■□□□□ 0.37
SMG8-203ENST00000578922 KCNK7Q9Y2U2 307 aa17.36■□□□□ 0.37
SMG8-203ENST00000578922 A0A0A6YYD4 124 aa17.36■□□□□ 0.37
SMG8-203ENST00000578922 DBX1A6NMT0 343 aa17.36■□□□□ 0.37
SMG8-203ENST00000578922 GNB3P16520 340 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms