RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 ACSM4P0C7M7 580 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 RALBP11234 206 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 ZNF24P17028 368 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 GGT1P19440 569 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 NTF3P20783 257 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 BCKDHBP21953 392 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 RRM2P31350 389 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 TGFBR1P36897 503 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 TNFSF9P41273 254 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 RBM34P42696 430 aaKnown RBP1.3□□□□□ -2.2
CDC27-218ENST00000575830 RPS23P62266 143 aaKnown RBP1.3□□□□□ -2.2
CDC27-218ENST00000575830 RBX1P62877 108 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 SP4Q02446 784 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 MAD2L1BPQ15013 274 aaPredicted RBP1.3□□□□□ -2.2
CDC27-218ENST00000575830 LINC00303Q3SY05 128 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 CASP12Q6UXS9 341 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 ASCL4Q6XD76 172 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 MBOAT1Q6ZNC8 495 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 LINC00336Q6ZUF6 198 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 CMTM1Q8IZ96 169 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 OR5T1Q8NG75 326 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 OR52K1Q8NGK4 314 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 OR5M1Q8NGP8 315 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 OR5B3Q8NH48 314 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 FAM81AQ8TBF8 368 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 GPX8Q8TED1 209 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 WDR34Q96EX3 536 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 RNF145Q96MT1 663 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 XPO6Q96QU8 1125 aaKnown RBP1.3□□□□□ -2.2
CDC27-218ENST00000575830 MICU1Q9BPX6 476 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 C8orf33Q9H7E9 229 aaPredicted RBP1.3□□□□□ -2.2
CDC27-218ENST00000575830 ZNF442Q9H7R0 627 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 MED4Q9NPJ6 270 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 RPRD1BQ9NQG5 326 aaKnown RBP1.3□□□□□ -2.2
CDC27-218ENST00000575830 PTTG3PQ9NZH4 202 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 CCDC59Q9P031 241 aaKnown RBP1.3□□□□□ -2.2
CDC27-218ENST00000575830 SLC17A7Q9P2U7 560 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 RHBDD3Q9Y3P4 386 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 MICAL3Q7RTP6 2002 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 ZNF236Q9UL36 1845 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 DNAH7Q8WXX0 4024 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 IGKV1-27A0A075B6S5 117 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 IGHV3-49A0A0A0MS15 119 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 IGHV3OR16-9A0A0B4J2B5 98 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 SUPT3HB4E1H0 165 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 TRDMT1O14717 391 aaKnown RBP1.29□□□□□ -2.2
CDC27-218ENST00000575830 PLIN3O60664 434 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 EIF1BO60739 113 aaKnown RBP1.29□□□□□ -2.2
CDC27-218ENST00000575830 FCN3O75636 299 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 CNMDO75829 334 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 OTCP00480 354 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 HLA-HP01893 362 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 ARG1P05089 322 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 MYL2P10916 166 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 HLA-EP13747 358 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 GTF2E2P29084 291 aaKnown RBP1.29□□□□□ -2.2
CDC27-218ENST00000575830 OR1E1P30953 314 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 HOXA6P31267 233 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 CCT6AP40227 531 aaKnown RBP1.29□□□□□ -2.2
CDC27-218ENST00000575830 EIF1P41567 113 aaKnown RBP1.29□□□□□ -2.2
CDC27-218ENST00000575830 MAGEA1P43355 309 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 UQCRFS1P47985 274 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 RPS11P62280 158 aaKnown RBP eCLIP1.29□□□□□ -2.2
CDC27-218ENST00000575830 RAB11AP62491 216 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 RAD51Q06609 339 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 PNOCQ13519 176 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 DOC2AQ14183 400 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 NCF4Q15080 339 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 RAB11BQ15907 218 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 HADHQ16836 314 aaKnown RBP1.29□□□□□ -2.2
CDC27-218ENST00000575830 RPEL1Q2QD12 228 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 YIF1BQ5BJH7 314 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 BEX5Q5H9J7 111 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 SPESP1Q6UW49 350 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 MBOAT2Q6ZWT7 520 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 EIF3MQ7L2H7 374 aaKnown RBP1.29□□□□□ -2.2
CDC27-218ENST00000575830 CENPQQ7L2Z9 268 aaPredicted RBP1.29□□□□□ -2.2
CDC27-218ENST00000575830 NKAIN4Q8IVV8 208 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 MICU2Q8IYU8 434 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 LRRC75AQ8NAA5 344 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 OR5K2Q8NHB8 316 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 LYPD6BQ8NI32 183 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 NUBPLQ8TB37 319 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 CAPSLQ8WWF8 208 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 NAT6Q93015 286 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 PRRC1Q96M27 445 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 ZFP3Q96NJ6 502 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 ZNF317Q96PQ6 595 aaPredicted RBP1.29□□□□□ -2.2
CDC27-218ENST00000575830 UCK2Q9BZX2 261 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 ZYG11BQ9C0D3 744 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 COA1Q9GZY4 146 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 OR2AG1Q9H205 316 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 CYP3A43Q9HB55 503 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 FANCEQ9HB96 536 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 RHBDL2Q9NX52 303 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 TRMT112Q9UI30 125 aaKnown RBP1.29□□□□□ -2.2
CDC27-218ENST00000575830 RCL1Q9Y2P8 373 aaKnown RBP1.29□□□□□ -2.2
CDC27-218ENST00000575830 BAZ2BQ9UIF8 2168 aaKnown RBP1.29□□□□□ -2.2
CDC27-218ENST00000575830 MED23Q9ULK4 1368 aa1.29□□□□□ -2.2
CDC27-218ENST00000575830 SCN10AQ9Y5Y9 1956 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms