RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, human

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB40B-204	ENST00000571554	SIRPB1	O00241	398 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	CHST1	O43916	411 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	PSPN	O60542	156 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	TSPAN9	O75954	239 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	TSPAN15	O95858	294 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	IGKV1D-12	P01611	117 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	ZNF728	P0DKX0	622 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	JUNB	P17275	347 aa	Predicted RBP	11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	GABRA5	P31644	462 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	DEFA6	Q01524	100 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	DYNC1I2	Q13409	638 aa	Known RBP	11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	ALKBH1	Q13686	389 aa	Known RBP	11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	GRK1	Q15835	563 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	SLC25A30	Q5SVS4	291 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	LDLRAD2	Q5SZI1	272 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	FAM58A	Q8N1B3	248 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	ZNF676	Q8N7Q3	588 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	C11orf44	Q8N8P7	122 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	OR4S1	Q8NGB4	309 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	C10orf35	Q96D05	121 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	SNX22	Q96L94	193 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	OPALIN	Q96PE5	141 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	NKX3-1	Q99801	234 aa	Predicted RBP	11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	C9orf16	Q9BUW7	83 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	MEGF9	Q9H1U4	602 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	S100A14	Q9HCY8	104 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	GSTK1	Q9Y2Q3	226 aa		11.15	□□□□□ -0.62
RAB40B-204	ENST00000571554	TRBV2	A0A0J9YWF9	115 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	OR4C45	A6NMZ5	311 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554		E9PI62	339 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	TIMM23	O14925	209 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	CYB5A	P00167	134 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	ISG15	P05161	165 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	IGHV1-8	P0DP01	117 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	PRKACB	P22694	351 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	ACTA2	P62736	377 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	ACTG2	P63267	376 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	PDZK1IP1	Q13113	114 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	FAM189A2	Q15884	450 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	LPCAT4	Q643R3	524 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	FDX2	Q6P4F2	183 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	LHFPL2	Q6ZUX7	228 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	UTS2B	Q765I0	119 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	KCTD20	Q7Z5Y7	419 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	DNAAF1	Q8NEP3	725 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	PIFO	Q8TCI5	191 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	ZNF714	Q96N38	554 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	NEK6	Q9HC98	313 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	ING3	Q9NXR8	418 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	HHLA2	Q9UM44	414 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	FOXJ3	Q9UPW0	622 aa		11.14	□□□□□ -0.63
RAB40B-204	ENST00000571554	MEGF11	A6BM72	1044 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	FAM172BP	A6NC97	362 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	SNTN	A6NMZ2	147 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	BAG2	O95816	211 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	PEX2	P28328	305 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	OR3A1	P47881	315 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	CCR9	P51686	369 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	SCN1B	Q07699	218 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	GALE	Q14376	348 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	SSX2	Q16385	188 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	CRIP3	Q6Q6R5	217 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	BAIAP2L2	Q6UXY1	529 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	ZBTB49	Q6ZSB9	765 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	TRAPPC6B	Q86SZ2	158 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	TMEM219	Q86XT9	240 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554		Q8IYB0	196 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	PQLC1	Q8N2U9	271 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	OR13D1	Q8NGV5	346 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	APH1B	Q8WW43	257 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	SPSB1	Q96BD6	273 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	PDCD1LG2	Q9BQ51	273 aa		11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	TET2	Q6N021	2002 aa	Predicted RBP	11.13	□□□□□ -0.63
RAB40B-204	ENST00000571554	LOC100130705	A0A1B0GUX0	176 aa		11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	hADV38S2	A0JD32	116 aa		11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	ODF3B	A8MYP8	253 aa		11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	MMP23A	O75900	390 aa		11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	OR2H2	O95918	312 aa		11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	HCK	P08631	526 aa		11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	HABP2	Q14520	560 aa	Predicted RBP	11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	SMN1	Q16637	294 aa	Known RBP	11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	CCBE1	Q6UXH8	406 aa	Predicted RBP	11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	OR52I1	Q8NGK6	324 aa		11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	OR4C13	Q8NGP0	309 aa		11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	RHOXF1	Q8NHV9	184 aa		11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	TSEN15	Q8WW01	171 aa	Known RBP	11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	ZNF649	Q9BS31	505 aa		11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	MMP27	Q9H306	513 aa		11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	HMG20A	Q9NP66	347 aa		11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	EXOSC4	Q9NPD3	245 aa	Known RBP	11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	FAM118A	Q9NWS6	357 aa		11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	ERVK13-1	Q9NX77	482 aa		11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	HILPDA	Q9Y5L2	63 aa		11.12	□□□□□ -0.63
RAB40B-204	ENST00000571554	FAM90A8P	A6NJQ4	464 aa		11.11	□□□□□ -0.63
RAB40B-204	ENST00000571554	EBAG9	O00559	213 aa		11.11	□□□□□ -0.63
RAB40B-204	ENST00000571554	KDM4B	O94953	1096 aa		11.11	□□□□□ -0.63
RAB40B-204	ENST00000571554	ZFPL1	O95159	310 aa		11.11	□□□□□ -0.63
RAB40B-204	ENST00000571554	CLIC3	O95833	236 aa		11.11	□□□□□ -0.63
RAB40B-204	ENST00000571554	FADS2	O95864	444 aa	Known RBP	11.11	□□□□□ -0.63

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