RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 ZNF488Q96MN9 340 aa19.63■□□□□ 0.73
RAB40C-212ENST00000569575 TMEM246Q9BRR3 403 aa19.63■□□□□ 0.73
RAB40C-212ENST00000569575 TMEM59Q9BXS4 323 aa19.63■□□□□ 0.73
RAB40C-212ENST00000569575 ZNF665Q9H7R5 613 aa19.63■□□□□ 0.73
RAB40C-212ENST00000569575 CCDC59Q9P031 241 aaKnown RBP19.63■□□□□ 0.73
RAB40C-212ENST00000569575 PCDHB10Q9UN67 800 aa19.63■□□□□ 0.73
RAB40C-212ENST00000569575 ST3GAL6Q9Y274 331 aa19.63■□□□□ 0.73
RAB40C-212ENST00000569575 PRRC2AP48634 2157 aaKnown RBP19.62■□□□□ 0.73
RAB40C-212ENST00000569575 ISPDA4D126 451 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 METTL21EPA6NDL7 271 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 NKX6-3A6NJ46 265 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 F8VVB4 439 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 F8VWA3 439 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 WNT9BO14905 357 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 CRTAPO75718 401 aaPredicted RBP19.62■□□□□ 0.73
RAB40C-212ENST00000569575 PSG2P11465 335 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 LMO1P25800 156 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 PRDX2P32119 198 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 NPY4RP50391 375 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 RBM11P57052 281 aaKnown RBP19.62■□□□□ 0.73
RAB40C-212ENST00000569575 SPCS2Q15005 226 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 IDNKQ5T6J7 187 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 MZT2AQ6P582 158 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 PPP1R35Q8TAP8 253 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 DYNC2LI1Q8TCX1 351 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 GAL3ST1Q99999 423 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 TM2D1Q9BX74 207 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 FAM234AQ9H0X4 552 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 SPATA2Q9UM82 520 aa19.62■□□□□ 0.73
RAB40C-212ENST00000569575 NOTCH2Q04721 2471 aa19.61■□□□□ 0.73
RAB40C-212ENST00000569575 RFPL4AA6NLU0 287 aa19.61■□□□□ 0.73
RAB40C-212ENST00000569575 RFPL4AL1F8VTS6 287 aa19.61■□□□□ 0.73
RAB40C-212ENST00000569575 GLAP06280 429 aa19.61■□□□□ 0.73
RAB40C-212ENST00000569575 USF1P22415 310 aaPredicted RBP19.61■□□□□ 0.73
RAB40C-212ENST00000569575 RPS27AP62979 156 aaKnown RBP19.61■□□□□ 0.73
RAB40C-212ENST00000569575 LOXL1Q08397 574 aaPredicted RBP19.61■□□□□ 0.73
RAB40C-212ENST00000569575 P2RY14Q15391 338 aa19.61■□□□□ 0.73
RAB40C-212ENST00000569575 ZNF788Q6ZQV5 615 aa19.61■□□□□ 0.73
RAB40C-212ENST00000569575 KRTAP1-3Q8IUG1 177 aa19.61■□□□□ 0.73
RAB40C-212ENST00000569575 PATZ1Q9HBE1 687 aaKnown RBP19.61■□□□□ 0.73
RAB40C-212ENST00000569575 ZNF222Q9UK12 451 aa19.61■□□□□ 0.73
RAB40C-212ENST00000569575 IGHV4-30-2A0A087WSY4 118 aa19.6■□□□□ 0.73
RAB40C-212ENST00000569575 IL13RA1P78552 427 aa19.6■□□□□ 0.73
RAB40C-212ENST00000569575 FAM201AQ5SY85 155 aa19.6■□□□□ 0.73
RAB40C-212ENST00000569575 AVPI1Q5T686 147 aa19.6■□□□□ 0.73
RAB40C-212ENST00000569575 DEFB108BQ8NET1 73 aa19.6■□□□□ 0.73
RAB40C-212ENST00000569575 OR5D13Q8NGL4 314 aa19.6■□□□□ 0.73
RAB40C-212ENST00000569575 NEIL1Q96FI4 390 aaPredicted RBP19.6■□□□□ 0.73
RAB40C-212ENST00000569575 Q96M66 194 aa19.6■□□□□ 0.73
RAB40C-212ENST00000569575 PDZD2O15018 2839 aa19.6■□□□□ 0.73
RAB40C-212ENST00000569575 IGKV1D-17A0A075B6S4 117 aa19.59■□□□□ 0.73
RAB40C-212ENST00000569575 SIGLEC5O15389 551 aa19.59■□□□□ 0.73
RAB40C-212ENST00000569575 HAND1O96004 215 aa19.59■□□□□ 0.73
RAB40C-212ENST00000569575 SLC2A2P11168 524 aaPredicted RBP19.59■□□□□ 0.73
RAB40C-212ENST00000569575 KCNJ3P48549 501 aa19.59■□□□□ 0.73
RAB40C-212ENST00000569575 CAV3P56539 151 aa19.59■□□□□ 0.73
RAB40C-212ENST00000569575 CLDN12P56749 244 aa19.59■□□□□ 0.73
RAB40C-212ENST00000569575 ARL6IP1Q15041 203 aa19.59■□□□□ 0.73
RAB40C-212ENST00000569575 RAB12Q6IQ22 244 aa19.59■□□□□ 0.73
RAB40C-212ENST00000569575 FAM89BQ8N5H3 189 aa19.59■□□□□ 0.73
RAB40C-212ENST00000569575 TMEM104Q8NE00 496 aa19.59■□□□□ 0.73
RAB40C-212ENST00000569575 OR8B3Q8NGG8 313 aa19.59■□□□□ 0.73
RAB40C-212ENST00000569575 OR10K1Q8NGX5 313 aa19.59■□□□□ 0.73
RAB40C-212ENST00000569575 DMRTB1Q96MA1 342 aa19.59■□□□□ 0.73
RAB40C-212ENST00000569575 OR8B2Q96RD0 313 aa19.59■□□□□ 0.73
RAB40C-212ENST00000569575 NKX3-1Q99801 234 aaPredicted RBP19.59■□□□□ 0.73
RAB40C-212ENST00000569575 NUDT16L1Q9BRJ7 211 aaKnown RBP19.59■□□□□ 0.73
RAB40C-212ENST00000569575 SELENOIQ9C0D9 397 aa19.59■□□□□ 0.73
RAB40C-212ENST00000569575 OR5V1Q9UGF6 321 aa19.59■□□□□ 0.73
RAB40C-212ENST00000569575 A3GALT2U3KPV4 340 aa19.59■□□□□ 0.73
RAB40C-212ENST00000569575 A0A0A6YYH2 397 aa19.58■□□□□ 0.72
RAB40C-212ENST00000569575 TMEM272A0A1B0GTI8 110 aa19.58■□□□□ 0.72
RAB40C-212ENST00000569575 A6NJ64 397 aa19.58■□□□□ 0.72
RAB40C-212ENST00000569575 CEACAM18A8MTB9 384 aa19.58■□□□□ 0.72
RAB40C-212ENST00000569575 DEGS1O15121 323 aa19.58■□□□□ 0.72
RAB40C-212ENST00000569575 MPIG6BO95866 241 aa19.58■□□□□ 0.72
RAB40C-212ENST00000569575 WNT2P09544 360 aa19.58■□□□□ 0.72
RAB40C-212ENST00000569575 GMFBP60983 142 aa19.58■□□□□ 0.72
RAB40C-212ENST00000569575 UNC119Q13432 240 aa19.58■□□□□ 0.72
RAB40C-212ENST00000569575 OR56B1Q8NGI3 324 aa19.58■□□□□ 0.72
RAB40C-212ENST00000569575 RAB40AQ8WXH6 277 aa19.58■□□□□ 0.72
RAB40C-212ENST00000569575 SNX22Q96L94 193 aa19.58■□□□□ 0.72
RAB40C-212ENST00000569575 Q96MF0 132 aa19.58■□□□□ 0.72
RAB40C-212ENST00000569575 REG4Q9BYZ8 158 aa19.58■□□□□ 0.72
RAB40C-212ENST00000569575 BARHL1Q9BZE3 327 aa19.58■□□□□ 0.72
RAB40C-212ENST00000569575 NBPF19A0A087WUL8 3843 aa19.58■□□□□ 0.72
RAB40C-212ENST00000569575 A0A075B6Q4 140 aa19.57■□□□□ 0.72
RAB40C-212ENST00000569575 IGHV3OR15-7A0A075B7D8 119 aa19.57■□□□□ 0.72
RAB40C-212ENST00000569575 SMIM30A4D0T7 59 aa19.57■□□□□ 0.72
RAB40C-212ENST00000569575 F5H0A9 414 aaPredicted RBP19.57■□□□□ 0.72
RAB40C-212ENST00000569575 TMPRSS2O15393 492 aa19.57■□□□□ 0.72
RAB40C-212ENST00000569575 ADAM20O43506 726 aa19.57■□□□□ 0.72
RAB40C-212ENST00000569575 ZNF205O95201 554 aa19.57■□□□□ 0.72
RAB40C-212ENST00000569575 GYPAP02724 150 aa19.57■□□□□ 0.72
RAB40C-212ENST00000569575 RPS2P15880 293 aaKnown RBP19.57■□□□□ 0.72
RAB40C-212ENST00000569575 GABRA2P47869 451 aa19.57■□□□□ 0.72
RAB40C-212ENST00000569575 RBM39Q14498 530 aaKnown RBP19.57■□□□□ 0.72
RAB40C-212ENST00000569575 LRRC10Q5BKY1 277 aa19.57■□□□□ 0.72
RAB40C-212ENST00000569575 OR14J1Q9UGF5 321 aa19.57■□□□□ 0.72
RAB40C-212ENST00000569575 CCDC168Q8NDH2 2452 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms