RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 MLLT11Q13015 90 aaPredicted RBP10.6□□□□□ -0.71
CDT1-203ENST00000569140 EDDM3AQ14507 147 aa10.6□□□□□ -0.71
CDT1-203ENST00000569140 TBCEQ15813 527 aaPredicted RBP10.6□□□□□ -0.71
CDT1-203ENST00000569140 ACSM3Q53FZ2 586 aa10.6□□□□□ -0.71
CDT1-203ENST00000569140 CEACAM19Q7Z692 300 aa10.6□□□□□ -0.71
CDT1-203ENST00000569140 SAXO1Q8IYX7 474 aa10.6□□□□□ -0.71
CDT1-203ENST00000569140 CMTM4Q8IZR5 234 aa10.6□□□□□ -0.71
CDT1-203ENST00000569140 OR4M1Q8NGD0 313 aa10.6□□□□□ -0.71
CDT1-203ENST00000569140 OR10K1Q8NGX5 313 aa10.6□□□□□ -0.71
CDT1-203ENST00000569140 C22orf15Q8WYQ4 148 aa10.6□□□□□ -0.71
CDT1-203ENST00000569140 DCTN5Q9BTE1 182 aa10.6□□□□□ -0.71
CDT1-203ENST00000569140 CHST6Q9GZX3 395 aa10.6□□□□□ -0.71
CDT1-203ENST00000569140 CNTD2Q9H8S5 307 aa10.6□□□□□ -0.71
CDT1-203ENST00000569140 TCF7L1Q9HCS4 588 aa10.6□□□□□ -0.71
CDT1-203ENST00000569140 EXOSC4Q9NPD3 245 aaKnown RBP10.6□□□□□ -0.71
CDT1-203ENST00000569140 TRBV5-7A0A0A0MS05 114 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 MAGEA13PA6NCF6 341 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 SH2D1BO14796 132 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 GPR37O15354 613 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 CDRT1O95170 752 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 HTR3BO95264 441 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 SFTPBP07988 381 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 ZNF44P15621 663 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 IGFBP3P17936 291 aaPredicted RBP10.59□□□□□ -0.71
CDT1-203ENST00000569140 SERPINA2P20848 420 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 SPIN3Q5JUX0 258 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 ZNF529Q6P280 563 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 GDPD3Q7L5L3 318 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 ZSCAN4Q8NAM6 433 aaPredicted RBP10.59□□□□□ -0.71
CDT1-203ENST00000569140 WDFY2Q96P53 400 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 MGLLQ99685 303 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 MS4A7Q9GZW8 240 aaPredicted RBP10.59□□□□□ -0.71
CDT1-203ENST00000569140 METTL9Q9H1A3 318 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 HMG20AQ9NP66 347 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 ACOT13Q9NPJ3 140 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 NUP50Q9UKX7 468 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 TLN2Q9Y4G6 2542 aa10.59□□□□□ -0.71
CDT1-203ENST00000569140 MEX3AA1L020 520 aaKnown RBP10.58□□□□□ -0.72
CDT1-203ENST00000569140 CSTBP04080 98 aaKnown RBP10.58□□□□□ -0.72
CDT1-203ENST00000569140 TK1P04183 234 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 ALDOBP05062 364 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 IGHV4-38-2P0DP08 117 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 CPEP16870 476 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 PSMB9P28065 219 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 PTGFRP43088 359 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 RPL31P62899 125 aaKnown RBP10.58□□□□□ -0.72
CDT1-203ENST00000569140 EMX1Q04741 257 aaPredicted RBP10.58□□□□□ -0.72
CDT1-203ENST00000569140 GPR50Q13585 617 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 BLMHQ13867 455 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 PDCD1Q15116 288 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 GRK1Q15835 563 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 HSD17B12Q53GQ0 312 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 FAM27D1Q5T7N8 215 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 GPR157Q5UAW9 335 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 VMO1Q7Z5L0 202 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 PDZD9Q8IXQ8 264 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 LHX4Q969G2 390 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 MUL1Q969V5 352 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 DACT3Q96B18 629 aaPredicted RBP10.58□□□□□ -0.72
CDT1-203ENST00000569140 SLC6A7Q99884 636 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 YTHDF1Q9BYJ9 559 aaKnown RBP10.58□□□□□ -0.72
CDT1-203ENST00000569140 SLITRK2Q9H156 845 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 ISYNA1Q9NPH2 558 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 SIRT7Q9NRC8 400 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 C19orf12Q9NSK7 152 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 ING3Q9NXR8 418 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 FOXJ3Q9UPW0 622 aa10.58□□□□□ -0.72
CDT1-203ENST00000569140 MRPS28Q9Y2Q9 187 aaKnown RBP10.58□□□□□ -0.72
CDT1-203ENST00000569140 ANK3Q12955 4377 aaKnown RBP10.57□□□□□ -0.72
CDT1-203ENST00000569140 TRBV23-1A0A0A0MS06 115 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 A0A1W2PPH5 198 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 HSPB6O14558 160 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 PIN1P1O15428 100 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 MRPS14O60783 128 aaKnown RBP10.57□□□□□ -0.72
CDT1-203ENST00000569140 OR2H2O95918 312 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 FPR2P25090 351 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 MTNR1BP49286 362 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 BMXP51813 675 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 SRSF2Q01130 221 aaKnown RBP10.57□□□□□ -0.72
CDT1-203ENST00000569140 PRB3Q04118 309 aaPredicted RBP10.57□□□□□ -0.72
CDT1-203ENST00000569140 TPBGQ13641 420 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 TRAM1Q15629 374 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 C11orf91Q3C1V1 193 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 KLF17Q5JT82 389 aaPredicted RBP10.57□□□□□ -0.72
CDT1-203ENST00000569140 AWAT2Q6E213 333 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 CRIP3Q6Q6R5 217 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 BRD3OSQ6XYD6 125 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 PHC2Q8IXK0 858 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 NKAIN3Q8N8D7 197 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 PXT1Q8NFP0 134 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 PPP1R35Q8TAP8 253 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 UPRTQ96BW1 309 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 SNX22Q96L94 193 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 FAM234AQ9H0X4 552 aa10.57□□□□□ -0.72
CDT1-203ENST00000569140 NSD1Q96L73 2696 aaPredicted RBP10.57□□□□□ -0.72
CDT1-203ENST00000569140 TMEM82A0PJX8 343 aa10.56□□□□□ -0.72
CDT1-203ENST00000569140 K7N7A8 449 aa10.56□□□□□ -0.72
CDT1-203ENST00000569140 DEGS1O15121 323 aa10.56□□□□□ -0.72
CDT1-203ENST00000569140 TCF21O43680 179 aa10.56□□□□□ -0.72
CDT1-203ENST00000569140 PSMA1P25786 263 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms