RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 C16orf95Q9H693 158 aa6.35□□□□□ -1.39
CDH3-209ENST00000569080 AMBNQ9NP70 447 aa6.35□□□□□ -1.39
CDH3-209ENST00000569080 INPP5EQ9NRR6 644 aa6.35□□□□□ -1.39
CDH3-209ENST00000569080 HHLA2Q9UM44 414 aa6.35□□□□□ -1.39
CDH3-209ENST00000569080 SF3B6Q9Y3B4 125 aaKnown RBP6.35□□□□□ -1.39
CDH3-209ENST00000569080 DNAH3Q8TD57 4116 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 MEX3AA1L020 520 aaKnown RBP6.34□□□□□ -1.39
CDH3-209ENST00000569080 SNTNA6NMZ2 147 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 VGLL3A8MV65 326 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 H3BUX3 64 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 CHST1O43916 411 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 MPZL2O60487 215 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 KDM4BO94953 1096 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 FADS2O95864 444 aaKnown RBP6.34□□□□□ -1.39
CDH3-209ENST00000569080 PAHP00439 452 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 SERPINA3P01011 423 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 CRYBA1P05813 215 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 CHRM2P08172 466 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 ZNF728P0DKX0 622 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 ZNF20P17024 532 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 PRKACBP22694 351 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 COX7A1P24310 79 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 DUSP1P28562 367 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 POU3F4P49335 361 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 ATP1B3P54709 279 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 ZP1P60852 638 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 AANATQ16613 207 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 LRRC75BQ2VPJ9 315 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 SPIN3Q5JUX0 258 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 ZNF626Q68DY1 528 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 XAF1Q6GPH4 301 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 DHRS7BQ6IAN0 325 aaPredicted RBP6.34□□□□□ -1.39
CDH3-209ENST00000569080 TREML4Q6UXN2 200 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 ZNF782Q6ZMW2 699 aaPredicted RBP6.34□□□□□ -1.39
CDH3-209ENST00000569080 LHFPL4Q7Z7J7 247 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 EGFL6Q8IUX8 553 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 FAM58AQ8N1B3 248 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 PARP16Q8N5Y8 322 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 TPRX1Q8N7U7 411 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 OR4S1Q8NGB4 309 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 OR5D18Q8NGL1 313 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 OR13C3Q8NGS6 347 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 OR13C9Q8NGT0 318 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 PPP1R35Q8TAP8 253 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 RFT1Q96AA3 541 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 SNX22Q96L94 193 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 PDCD1LG2Q9BQ51 273 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 ADI1Q9BV57 179 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 CHST6Q9GZX3 395 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 COMMD4Q9H0A8 199 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 HMG20AQ9NP66 347 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 FGF20Q9NP95 211 aaPredicted RBP6.34□□□□□ -1.39
CDH3-209ENST00000569080 SMPD3Q9NY59 655 aaPredicted RBP6.34□□□□□ -1.39
CDH3-209ENST00000569080 RNF114Q9Y508 228 aa6.34□□□□□ -1.39
CDH3-209ENST00000569080 A0A1W2PPH5 198 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 BTBD17A6NE02 478 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 TMEM212A6NML5 194 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 WIPF1O43516 503 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 INMTO95050 263 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 ALX3O95076 343 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 CLIC3O95833 236 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 IGHV1-8P0DP01 117 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 CALCBP10092 127 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 PEX2P28328 305 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 TGFBR2P37173 567 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 MTCP1P56278 107 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 P2RX3P56373 397 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 EDDM3BP56851 147 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 MEF2CQ06413 473 aaPredicted RBP6.33□□□□□ -1.4
CDH3-209ENST00000569080 MRPL28Q13084 256 aaKnown RBP6.33□□□□□ -1.4
CDH3-209ENST00000569080 IL18R1Q13478 541 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 EDDM3AQ14507 147 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 GRK1Q15835 563 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 ZNF691Q5VV52 312 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 LPCAT4Q643R3 524 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 BRICD5Q6PL45 260 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 GDPD3Q7L5L3 318 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 C10orf67Q8IYJ2 551 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 SAXO1Q8IYX7 474 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 ZNF676Q8N7Q3 588 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 OR11H6Q8NGC7 330 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 OR51A2Q8NGJ7 313 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 CNIH3Q8TBE1 160 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 Q96MT0 163 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 ZNF714Q96N38 554 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 SSX3Q99909 188 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 ZCCHC4Q9H5U6 513 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 HEXA-AS1Q9H8Q6 139 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 RPL36Q9Y3U8 105 aaKnown RBP6.33□□□□□ -1.4
CDH3-209ENST00000569080 LINC00312Q9Y6C7 94 aa6.33□□□□□ -1.4
CDH3-209ENST00000569080 IGHV2-26A0A0B4J1V2 119 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 MGST3O14880 152 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 SULT1B1O43704 296 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 MMP23AO75900 390 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 OR2H2O95918 312 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 LALBAP00709 142 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 CSN2P05814 226 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 CCDC159P0C7I6 412 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 PRKACAP17612 351 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 GABRR1P24046 479 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms