RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 IGHA1P01876 353 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 TMEM11P17152 192 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 CEACAM3P40198 252 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 POU3F4P49335 361 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 LIPEQ05469 1076 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 FOXE3Q13461 319 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 GRK1Q15835 563 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 HLA-DRB5Q30154 266 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 COQ5Q5HYK3 327 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 ASRGL1Q7L266 308 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 ZNF573Q86YE8 665 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 THNSL2Q86YJ6 484 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 Q8N1Y9 231 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 RNF152Q8N8N0 203 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 DCUN1D4Q92564 292 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 FAM162AQ96A26 154 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 SNX22Q96L94 193 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 INTS14Q96SY0 518 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 SPATA25Q9BR10 227 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 MED20Q9H944 212 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 GPR173Q9NS66 373 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 C19orf73Q9NVV2 129 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 KIAA1456Q9P272 454 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 PIGLQ9Y2B2 252 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 POLDIP2Q9Y2S7 368 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 ARL2BPQ9Y2Y0 163 aa9.13□□□□□ -0.95
CLK3-222ENST00000568232 PQLC2LA1A4F0 135 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 AP4M1O00189 453 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 TOR1AO14656 332 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 FGF16O43320 207 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 SLC25A17O43808 307 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 SNX3O60493 162 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 PSPNO60542 156 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 ATP5HO75947 161 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 GADD45GO95257 159 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 NRASP01111 189 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 ELANEP08246 267 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 GABRR1P24046 479 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 GSTT1P30711 240 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 ESRRGP62508 458 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 RIPPLY1Q0D2K3 151 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 TSPAN31Q12999 210 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 DIAPH2-AS1Q14236 149 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 HAGHQ16775 308 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 ZNF684Q5T5D7 378 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 OR52W1Q6IF63 320 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 CCDC144NLQ6NUI1 221 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 TRPM8Q7Z2W7 1104 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 COMMD2Q86X83 199 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 SLC15A3Q8IY34 581 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 OR52L1Q8NGH7 329 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 OR1N2Q8NGR9 330 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 OR51E1Q8TCB6 317 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 GNPDA2Q8TDQ7 276 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 THEM6Q8WUY1 208 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 OR5B12Q96R08 314 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 NIPAL2Q9H841 368 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 GNB4Q9HAV0 340 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 GID8Q9NWU2 228 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 IL36RNQ9UBH0 155 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 CDH10Q9Y6N8 788 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 SORL1Q92673 2214 aa9.12□□□□□ -0.95
CLK3-222ENST00000568232 DSCAML1Q8TD84 2053 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 A0A0G2JND7 137 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 A6NIN4 97 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 OVOL1O14753 267 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 GSC2O15499 205 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 OR8U8P0C7N1 319 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 MPZP25189 248 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 PEX2P28328 305 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 GPR12P47775 334 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 NUDT2P50583 147 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 PSMA6P60900 246 aaKnown RBP9.11□□□□□ -0.95
CLK3-222ENST00000568232 GNB1P62873 340 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 KLF10Q13118 480 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 HEPN1Q6WQI6 88 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 SHFQ7M4L6 423 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 CATSPERDQ86XM0 798 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 STON2Q8WXE9 905 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 TOMM40LQ969M1 308 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 ST6GALNAC6Q969X2 333 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 CREB3L1Q96BA8 519 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 RETNQ9HD89 108 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 GPR84Q9NQS5 396 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 DCAF13Q9NV06 445 aaKnown RBP9.11□□□□□ -0.95
CLK3-222ENST00000568232 MTCH1Q9NZJ7 389 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 ENPP5Q9UJA9 477 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 KLHDC2Q9Y2U9 406 aa9.11□□□□□ -0.95
CLK3-222ENST00000568232 UBE2J1Q9Y385 318 aaPredicted RBP9.11□□□□□ -0.95
CLK3-222ENST00000568232 FAM183AA6NL82 134 aa9.1□□□□□ -0.95
CLK3-222ENST00000568232 BBIP1A8MTZ0 92 aa9.1□□□□□ -0.95
CLK3-222ENST00000568232 OOSP1A8MZH6 123 aa9.1□□□□□ -0.95
CLK3-222ENST00000568232 I3L521 148 aa9.1□□□□□ -0.95
CLK3-222ENST00000568232 NME4O00746 187 aa9.1□□□□□ -0.95
CLK3-222ENST00000568232 DCTN3O75935 186 aa9.1□□□□□ -0.95
CLK3-222ENST00000568232 IGKV1D-33P01593 117 aa9.1□□□□□ -0.95
CLK3-222ENST00000568232 IGKV1-33P01594 117 aa9.1□□□□□ -0.95
CLK3-222ENST00000568232 IGHV3-7P01780 117 aa9.1□□□□□ -0.95
CLK3-222ENST00000568232 IFNA6P05013 189 aa9.1□□□□□ -0.95
CLK3-222ENST00000568232 LYNP07948 512 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms