RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 HNRNPCP07910 306 aaKnown RBP eCLIP4.87□□□□□ -1.634e-6■■■□□ 18.9
SF3B3-210ENST00000567654 MELTFP08582 738 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 UBBP0CG47 229 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 TMEM225BP0DP42 221 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 GTF2F2P13984 249 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 HIST1H1DP16402 221 aaKnown RBP4.87□□□□□ -1.63
SF3B3-210ENST00000567654 SELEP16581 610 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 BCL3P20749 454 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 PRKACBP22694 351 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 IL32P24001 234 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 GABRR1P24046 479 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 RBP2P50120 134 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 FUT6P51993 359 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 PPP1CBP62140 327 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 NHLH2Q02577 135 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 TGFBR3Q03167 851 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 FAM27E3Q08E93 113 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 PDZK1IP1Q13113 114 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 SNTB2Q13425 540 aaKnown RBP4.87□□□□□ -1.63
SF3B3-210ENST00000567654 ST3GAL2Q16842 350 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 CDNFQ49AH0 187 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 PLET1Q6UQ28 207 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 BTN2A1Q7KYR7 527 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 C6orf201Q7Z4U5 140 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 C5orf24Q7Z6I8 188 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 DPPA2Q7Z7J5 298 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 TRAPPC6BQ86SZ2 158 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 ZDHHC23Q8IYP9 409 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 ZNF611Q8N823 705 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 PNLDC1Q8NA58 520 aaKnown RBP4.87□□□□□ -1.63
SF3B3-210ENST00000567654 TMEM229BQ8NBD8 167 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 BEST4Q8NFU0 473 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 OR51T1Q8NGJ9 327 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 OR1J1Q8NGS3 322 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 OR6F1Q8NGZ6 308 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 OR8S1Q8NH09 359 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 OR56B4Q8NH76 319 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 KCNG3Q8TAE7 436 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 MAFIPQ8WZ33 124 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 ST8SIA4Q92187 359 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 GTF3AQ92664 365 aaKnown RBP4.87□□□□□ -1.63
SF3B3-210ENST00000567654 SNAPC3Q92966 411 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 SLAMF9Q96A28 289 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 CREB3L1Q96BA8 519 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 S100PBPQ96BU1 408 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 MARS2Q96GW9 593 aaKnown RBP4.87□□□□□ -1.63
SF3B3-210ENST00000567654 ST6GAL2Q96JF0 529 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 ZNF488Q96MN9 340 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 C7orf50Q9BRJ6 194 aaKnown RBP4.87□□□□□ -1.63
SF3B3-210ENST00000567654 CACNG6Q9BXT2 260 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 PECRQ9BY49 303 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 C20orf85Q9H1P6 137 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 OR10A4Q9H209 315 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 TP63Q9H3D4 680 aaPredicted RBP4.87□□□□□ -1.63
SF3B3-210ENST00000567654 GHITMQ9H3K2 345 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 ELL3Q9HB65 397 aaPredicted RBP4.87□□□□□ -1.63
SF3B3-210ENST00000567654 CDH20Q9HBT6 801 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 NEK6Q9HC98 313 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 NKIRAS2Q9NYR9 191 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 ZNF221Q9UK13 617 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 FZR1Q9UM11 496 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 ANAPC10Q9UM13 185 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 NUBP2Q9Y5Y2 271 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 RP1L1Q8IWN7 2480 aaPredicted RBP4.87□□□□□ -1.63
SF3B3-210ENST00000567654 CACNA1AO00555 2505 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 NCOR2Q9Y618 2525 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 CHD8Q9HCK8 2581 aa4.87□□□□□ -1.63
SF3B3-210ENST00000567654 IGHV2OR16-5A0A0B4J2B6 119 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 IGHV3-64DA0A0J9YX35 117 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 C7orf66A4D0T2 115 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 METTL21EPA6NDL7 271 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 HMX3A6NHT5 357 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 CENPXA8MT69 81 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 A8MXE2 369 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 PYCARD-AS1I3L0S3 204 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 GEMIN2O14893 280 aaKnown RBP4.86□□□□□ -1.63
SF3B3-210ENST00000567654 MLNRO43193 412 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 RHBDL1O75783 438 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 SCAF4O95104 1147 aaKnown RBP4.86□□□□□ -1.63
SF3B3-210ENST00000567654 NDUFB6O95139 128 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 ECDO95905 644 aaPredicted RBP4.86□□□□□ -1.63
SF3B3-210ENST00000567654 CD74P04233 296 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 CSN2P05814 226 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 CHRM2P08172 466 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 AKAIN1P0CW23 69 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 ANXA7P20073 488 aaKnown RBP4.86□□□□□ -1.63
SF3B3-210ENST00000567654 BMP5P22003 454 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 CA6P23280 308 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 HLA-DMAP28067 261 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 CHATP28329 748 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 BLVRBP30043 206 aaPredicted RBP4.86□□□□□ -1.63
SF3B3-210ENST00000567654 RAD52P43351 418 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 RANBP1P43487 201 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 HAAOP46952 286 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 ZNF83P51522 516 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 GPM6AP51674 278 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 CAPZA1P52907 286 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 NKX2-5P52952 324 aaPredicted RBP4.86□□□□□ -1.63
SF3B3-210ENST00000567654 ATP1B3P54709 279 aa4.86□□□□□ -1.63
SF3B3-210ENST00000567654 UCNP55089 124 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms