RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 GPER1Q99527 375 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 RTL8AQ9BWD3 113 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 PCDHB16Q9NRJ7 776 aa11.24□□□□□ -0.61
CLK3-218ENST00000566926 POLR3KQ9Y2Y1 108 aaPredicted RBP11.24□□□□□ -0.61
CLK3-218ENST00000566926 TRAV38-1A0A0B4J264 116 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 IGKV1-9A0A0C4DH69 117 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 hCG_1807616A0A1W2PRN6 198 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 A6NIN4 97 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 TMEM210A6NLX4 147 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 A8MXK9 166 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 NDUFA2O43678 99 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 HPGDSO60760 199 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 ZNF780AO75290 641 aaPredicted RBP11.23□□□□□ -0.61
CLK3-218ENST00000566926 WNT2P09544 360 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 SLC2A2P11168 524 aaPredicted RBP11.23□□□□□ -0.61
CLK3-218ENST00000566926 RPS2P15880 293 aaKnown RBP11.23□□□□□ -0.61
CLK3-218ENST00000566926 RAB6AP20340 208 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 PPP5CP53041 499 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 ATP1B3P54709 279 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 LCN2P80188 198 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 DCTN2Q13561 401 aaKnown RBP11.23□□□□□ -0.61
CLK3-218ENST00000566926 GPR176Q14439 515 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 PLCXD3Q63HM9 321 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 DCDC5Q6ZRR9 648 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 OR2W3Q7Z3T1 314 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 MFSD4AQ8N468 514 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 ZSCAN4Q8NAM6 433 aaPredicted RBP11.23□□□□□ -0.61
CLK3-218ENST00000566926 OR8B3Q8NGG8 313 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 OR5A2Q8NGI9 324 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 PIGCQ92535 297 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 DVL3Q92997 716 aaPredicted RBP11.23□□□□□ -0.61
CLK3-218ENST00000566926 S100A16Q96FQ6 103 aaKnown RBP11.23□□□□□ -0.61
CLK3-218ENST00000566926 OR8B2Q96RD0 313 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 S100A13Q99584 98 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 TMEM246Q9BRR3 403 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 CST11Q9H112 138 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 ABCG5Q9H222 651 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 CNTD2Q9H8S5 307 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 C1orf123Q9NWV4 160 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 OR5V1Q9UGF6 321 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 METRNQ9UJH8 293 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 RHBDD3Q9Y3P4 386 aa11.23□□□□□ -0.61
CLK3-218ENST00000566926 ATRQ13535 2644 aa11.22□□□□□ -0.61
CLK3-218ENST00000566926 FABP12A6NFH5 140 aa11.22□□□□□ -0.61
CLK3-218ENST00000566926 KIAA1324LA8MWY0 1029 aaPredicted RBP11.22□□□□□ -0.61
CLK3-218ENST00000566926 FAM25AB3EWG3 89 aa11.22□□□□□ -0.61
CLK3-218ENST00000566926 FAM25CB3EWG5 89 aa11.22□□□□□ -0.61
CLK3-218ENST00000566926 FAM25GB3EWG6 89 aa11.22□□□□□ -0.61
CLK3-218ENST00000566926 LGALS8O00214 317 aa11.22□□□□□ -0.61
CLK3-218ENST00000566926 ZNF205O95201 554 aa11.22□□□□□ -0.61
CLK3-218ENST00000566926 SNRPBP14678 240 aaKnown RBP11.22□□□□□ -0.61
CLK3-218ENST00000566926 POU3F4P49335 361 aa11.22□□□□□ -0.61
CLK3-218ENST00000566926 MTCP1P56278 107 aa11.22□□□□□ -0.61
CLK3-218ENST00000566926 GNB2P62879 340 aa11.22□□□□□ -0.61
CLK3-218ENST00000566926 PITPNAQ00169 270 aa11.22□□□□□ -0.61
CLK3-218ENST00000566926 PRDX4Q13162 271 aa11.22□□□□□ -0.61
CLK3-218ENST00000566926 AWAT2Q6E213 333 aa11.22□□□□□ -0.61
CLK3-218ENST00000566926 SLC25A28Q96A46 364 aa11.22□□□□□ -0.61
CLK3-218ENST00000566926 CCDC32Q9BV29 185 aa11.22□□□□□ -0.61
CLK3-218ENST00000566926 SSBP3Q9BWW4 388 aaPredicted RBP11.22□□□□□ -0.61
CLK3-218ENST00000566926 MIXL1Q9H2W2 232 aa11.22□□□□□ -0.61
CLK3-218ENST00000566926 GPR173Q9NS66 373 aa11.22□□□□□ -0.61
CLK3-218ENST00000566926 MRPS28Q9Y2Q9 187 aaKnown RBP11.22□□□□□ -0.61
CLK3-218ENST00000566926 MXRA5Q9NR99 2828 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 METTL21EPA6NDL7 271 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 ZNF850A8MQ14 1090 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 PAHP00439 452 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 ELK1P19419 428 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 PTGFRP43088 359 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 NPY4RP50391 375 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 GNG3P63215 75 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 C2orf76Q3KRA6 126 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 FAM201AQ5SY85 155 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 RAB12Q6IQ22 244 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 CNIH2Q6PI25 160 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 FAM131AQ6UXB0 335 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 MOB3CQ70IA8 216 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 ANGPTL5Q86XS5 388 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 SAXO1Q8IYX7 474 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 GDPD1Q8N9F7 314 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 BOLLQ8N9W6 283 aaKnown RBP11.21□□□□□ -0.61
CLK3-218ENST00000566926 PXT1Q8NFP0 134 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 OR51D1Q8NGF3 324 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 OR4D6Q8NGJ1 314 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 KCNG3Q8TAE7 436 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 NANPQ8TBE9 248 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 OR5P3Q8WZ94 311 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 PHF21AQ96BD5 680 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 ITPKCQ96DU7 683 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 RNF170Q96K19 258 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 NUDT16L1Q9BRJ7 211 aaKnown RBP11.21□□□□□ -0.61
CLK3-218ENST00000566926 TMPRSS13Q9BYE2 586 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 C7orf69Q9H7B7 122 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 RHOFQ9HBH0 211 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 RHBDL2Q9NX52 303 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 EXTL2Q9UBQ6 330 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 CLN8Q9UBY8 286 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 RAB22AQ9UL26 194 aa11.21□□□□□ -0.61
CLK3-218ENST00000566926 PQLC2LA1A4F0 135 aa11.2□□□□□ -0.62
CLK3-218ENST00000566926 OOEPA6NGQ2 149 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms