RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 BCL7BQ9BQE9 202 aa21.63■■□□□ 1.05
NME3-208ENST00000565379 ZNF665Q9H7R5 613 aa21.63■■□□□ 1.05
NME3-208ENST00000565379 RBFOX1Q9NWB1 397 aaKnown RBP21.63■■□□□ 1.05
NME3-208ENST00000565379 IGHV3OR15-7A0A075B7D8 119 aa21.62■■□□□ 1.05
NME3-208ENST00000565379 SHISA3A0PJX4 238 aa21.62■■□□□ 1.05
NME3-208ENST00000565379 TMEM127O75204 238 aa21.62■■□□□ 1.05
NME3-208ENST00000565379 IGHV2-5P01817 119 aa21.62■■□□□ 1.05
NME3-208ENST00000565379 GYPAP02724 150 aa21.62■■□□□ 1.05
NME3-208ENST00000565379 SFTPBP07988 381 aa21.62■■□□□ 1.05
NME3-208ENST00000565379 RPS2P15880 293 aaKnown RBP21.62■■□□□ 1.05
NME3-208ENST00000565379 SDC2P34741 201 aa21.62■■□□□ 1.05
NME3-208ENST00000565379 ZNF146Q15072 292 aa21.62■■□□□ 1.05
NME3-208ENST00000565379 RAB11BQ15907 218 aa21.62■■□□□ 1.05
NME3-208ENST00000565379 DGUOKQ16854 277 aa21.62■■□□□ 1.05
NME3-208ENST00000565379 GPR107Q5VW38 600 aa21.62■■□□□ 1.05
NME3-208ENST00000565379 FAM166AQ6J272 317 aa21.62■■□□□ 1.05
NME3-208ENST00000565379 NEIL1Q96FI4 390 aaPredicted RBP21.62■■□□□ 1.05
NME3-208ENST00000565379 MED30Q96HR3 178 aa21.62■■□□□ 1.05
NME3-208ENST00000565379 GFI1Q99684 422 aa21.62■■□□□ 1.05
NME3-208ENST00000565379 BEX2Q9BXY8 128 aa21.62■■□□□ 1.05
NME3-208ENST00000565379 NARFLQ9H6Q4 476 aa21.62■■□□□ 1.05
NME3-208ENST00000565379 NOTOA8MTQ0 251 aa21.61■■□□□ 1.05
NME3-208ENST00000565379 F5H0A9 414 aaPredicted RBP21.61■■□□□ 1.05
NME3-208ENST00000565379 CDRT1O95170 752 aa21.61■■□□□ 1.05
NME3-208ENST00000565379 TGFAP01135 160 aa21.61■■□□□ 1.05
NME3-208ENST00000565379 PSG2P11465 335 aa21.61■■□□□ 1.05
NME3-208ENST00000565379 GTF2F2P13984 249 aa21.61■■□□□ 1.05
NME3-208ENST00000565379 PRKACAP17612 351 aa21.61■■□□□ 1.05
NME3-208ENST00000565379 NPY4RP50391 375 aa21.61■■□□□ 1.05
NME3-208ENST00000565379 LMO4P61968 165 aa21.61■■□□□ 1.05
NME3-208ENST00000565379 HOXA4Q00056 320 aaPredicted RBP21.61■■□□□ 1.05
NME3-208ENST00000565379 SRSF2Q01130 221 aaKnown RBP21.61■■□□□ 1.05
NME3-208ENST00000565379 CROCCP3Q8IVE0 287 aa21.61■■□□□ 1.05
NME3-208ENST00000565379 OR8B3Q8NGG8 313 aa21.61■■□□□ 1.05
NME3-208ENST00000565379 OR8B2Q96RD0 313 aa21.61■■□□□ 1.05
NME3-208ENST00000565379 CST11Q9H112 138 aa21.61■■□□□ 1.05
NME3-208ENST00000565379 KCNS2Q9ULS6 477 aa21.61■■□□□ 1.05
NME3-208ENST00000565379 RFPL4AA6NLU0 287 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 IFITM5A6NNB3 132 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 RFPL4AL1F8VTS6 287 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 F8VVB4 439 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 F8VWA3 439 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 AIPO00170 330 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 HTR3BO95264 441 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 BPNT1O95861 308 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 WNT2P09544 360 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 NHLRC3Q5JS37 347 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 FAM120AOSQ5T036 256 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 ZNF788Q6ZQV5 615 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 SLC16A12Q6ZSM3 486 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 OR51T1Q8NGJ9 327 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 SEH1LQ96EE3 360 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 SDSLQ96GA7 329 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 SHARPINQ9H0F6 387 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 RNF167Q9H6Y7 350 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 STEAP1Q9UHE8 339 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 ZNF222Q9UK12 451 aa21.6■■□□□ 1.05
NME3-208ENST00000565379 TMPRSS2O15393 492 aa21.59■■□□□ 1.05
NME3-208ENST00000565379 PHF1O43189 567 aaPredicted RBP21.59■■□□□ 1.05
NME3-208ENST00000565379 ADAM20O43506 726 aa21.59■■□□□ 1.05
NME3-208ENST00000565379 IL1AP01583 271 aa21.59■■□□□ 1.05
NME3-208ENST00000565379 CHRM2P08172 466 aa21.59■■□□□ 1.05
NME3-208ENST00000565379 PRDX2P32119 198 aa21.59■■□□□ 1.05
NME3-208ENST00000565379 TMBIM6P55061 237 aa21.59■■□□□ 1.05
NME3-208ENST00000565379 LSM3P62310 102 aaKnown RBP21.59■■□□□ 1.05
NME3-208ENST00000565379 IL13RA2Q14627 380 aa21.59■■□□□ 1.05
NME3-208ENST00000565379 C11orf91Q3C1V1 193 aa21.59■■□□□ 1.05
NME3-208ENST00000565379 SLC22A6Q4U2R8 563 aa21.59■■□□□ 1.05
NME3-208ENST00000565379 LINC00596Q86U02 117 aa21.59■■□□□ 1.05
NME3-208ENST00000565379 BATF2Q8N1L9 274 aa21.59■■□□□ 1.05
NME3-208ENST00000565379 OSR2Q8N2R0 312 aa21.59■■□□□ 1.05
NME3-208ENST00000565379 ZNF561Q8N587 486 aa21.59■■□□□ 1.05
NME3-208ENST00000565379 OR5T2Q8NGG2 359 aa21.59■■□□□ 1.05
NME3-208ENST00000565379 RAB2BQ8WUD1 216 aa21.59■■□□□ 1.05
NME3-208ENST00000565379 C1orf159Q96HA4 380 aa21.59■■□□□ 1.05
NME3-208ENST00000565379 NKX3-1Q99801 234 aaPredicted RBP21.59■■□□□ 1.05
NME3-208ENST00000565379 LPAR3Q9UBY5 353 aa21.59■■□□□ 1.05
NME3-208ENST00000565379 IGKV1D-17A0A075B6S4 117 aa21.58■■□□□ 1.05
NME3-208ENST00000565379 SH2D1BO14796 132 aa21.58■■□□□ 1.05
NME3-208ENST00000565379 NOL3O60936 208 aaKnown RBP21.58■■□□□ 1.05
NME3-208ENST00000565379 ARSBP15848 533 aa21.58■■□□□ 1.05
NME3-208ENST00000565379 SERPINA2P20848 420 aa21.58■■□□□ 1.05
NME3-208ENST00000565379 GABRA2P47869 451 aa21.58■■□□□ 1.05
NME3-208ENST00000565379 IL13RA1P78552 427 aa21.58■■□□□ 1.05
NME3-208ENST00000565379 CTF1Q16619 201 aa21.58■■□□□ 1.05
NME3-208ENST00000565379 CLVS1Q8IUQ0 354 aaPredicted RBP21.58■■□□□ 1.05
NME3-208ENST00000565379 KCNG3Q8TAE7 436 aa21.58■■□□□ 1.05
NME3-208ENST00000565379 SLC25A28Q96A46 364 aa21.58■■□□□ 1.05
NME3-208ENST00000565379 H3BUI4 141 aa21.57■■□□□ 1.04
NME3-208ENST00000565379 GPR37O15354 613 aa21.57■■□□□ 1.04
NME3-208ENST00000565379 SIGLEC5O15389 551 aa21.57■■□□□ 1.04
NME3-208ENST00000565379 OR10A3P58181 314 aa21.57■■□□□ 1.04
NME3-208ENST00000565379 ESCO2Q56NI9 601 aa21.57■■□□□ 1.04
NME3-208ENST00000565379 OR2W3Q7Z3T1 314 aa21.57■■□□□ 1.04
NME3-208ENST00000565379 CHST4Q8NCG5 386 aa21.57■■□□□ 1.04
NME3-208ENST00000565379 OR10K1Q8NGX5 313 aa21.57■■□□□ 1.04
NME3-208ENST00000565379 C1orf147Q96MC9 270 aaPredicted RBP21.57■■□□□ 1.04
NME3-208ENST00000565379 CCL13Q99616 98 aa21.57■■□□□ 1.04
NME3-208ENST00000565379 MRI1Q9BV20 369 aa21.57■■□□□ 1.04
NME3-208ENST00000565379 FBLN5Q9UBX5 448 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms