RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 PARP16Q8N5Y8 322 aa11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 KIR3DL3Q8N743 410 aa11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 ASCC1Q8N9N2 400 aaKnown RBP11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 DNAAF1Q8NEP3 725 aa11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 C8orf46Q8TAG6 207 aa11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 Q9H521 79 aa11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 MEIOCA2RUB1 952 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 F8VVB4 439 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 F8VWA3 439 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 NPFFO15130 113 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 NOS1APO75052 506 aaPredicted RBP11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 OCM2P0CE71 109 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 OCMP0CE72 109 aaPredicted RBP11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 ATF1P18846 271 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 MPZP25189 248 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 COL10A1Q03692 680 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 ACSM1Q08AH1 577 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 TBC1D15Q8TC07 691 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 GPR148Q8TDV2 347 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 GHSRQ92847 366 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 EMG1Q92979 244 aaKnown RBP11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 RFT1Q96AA3 541 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 SDSLQ96GA7 329 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 PGLYRP3Q96LB9 341 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 NRIP2Q9BQI9 281 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 MND1Q9BWT6 205 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 PKIBQ9C010 78 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 PRDM13Q9H4Q3 707 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 DHDHQ9UQ10 334 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 ZNF281Q9Y2X9 895 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 LSM2Q9Y333 95 aaKnown RBP11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 PKD1L1Q8TDX9 2849 aa11.17□□□□□ -0.62
VPS9D1-204ENST00000565023 M0R1W7 72 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 RGS10O43665 173 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 ANGPTL7O43827 346 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 ALX3O95076 343 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 PAHP00439 452 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 MT-ND2P03891 347 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 CD1AP06126 327 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 FBP1P09467 338 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 CCL3L1P16619 93 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 PRKACBP22694 351 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 COX7A1P24310 79 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 AZGP1P25311 298 aaKnown RBP11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 ATP1B3P54709 279 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 ERVFRD-1P60508 538 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 RPL31P62899 125 aaKnown RBP11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 BDH1Q02338 343 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 GUCA2AQ02747 115 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 IL24Q13007 206 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 PRSS48Q7RTY5 328 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 SERPINA12Q8IW75 414 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 MKXQ8IYA7 352 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 ZNF561Q8N587 486 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 ZFP41Q8N8Y5 198 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 OR5D14Q8NGL3 314 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 TSEN15Q8WW01 171 aaKnown RBP11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 SSMEM1Q8WWF3 244 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 SPSB1Q96BD6 273 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 CEP19Q96LK0 163 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 ZNF747Q9BV97 191 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 ZCCHC4Q9H5U6 513 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 MTCH1Q9NZJ7 389 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 IL36RNQ9UBH0 155 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 BLOC1S6Q9UL45 172 aa11.16□□□□□ -0.62
VPS9D1-204ENST00000565023 TRBV23-1A0A0A0MS06 115 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 TRBV5-5A0A0J9YX44 114 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 SPRY1O43609 319 aaPredicted RBP11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 TK1P04183 234 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 CELP19835 753 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 PAX6P26367 422 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 DUSP1P28562 367 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 SAA4P35542 130 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 SOX2P48431 317 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 RBP2P50120 134 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 RAG2P55895 527 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 MTCP1P56278 107 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 EDDM3BP56851 147 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 RPS11P62280 158 aaKnown RBP eCLIP11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 EDDM3AQ14507 147 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 ZNF273Q14593 569 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 SPHARQ15513 63 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 YIF1BQ5BJH7 314 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 ZNF529Q6P280 563 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 ZNF782Q6ZMW2 699 aaPredicted RBP11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 OR13C9Q8NGT0 318 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 TNFRSF14Q92956 283 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 TMEM106AQ96A25 262 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 SPACA5Q96QH8 159 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 OR5M11Q96RB7 305 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 METTL8Q9H825 291 aaKnown RBP11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 HES4Q9HCC6 221 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 C1RLQ9NZP8 487 aa11.15□□□□□ -0.62
VPS9D1-204ENST00000565023 DSCAML1Q8TD84 2053 aa11.15□□□□□ -0.63
VPS9D1-204ENST00000565023 TENM1Q9UKZ4 2725 aa11.15□□□□□ -0.63
VPS9D1-204ENST00000565023 BTBD17A6NE02 478 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 GPR137BO60478 399 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 CYB5AP00167 134 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 KNG1P01042 644 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 CD2P06729 351 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms