RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 HTR1AP08908 422 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 IGHV1-8P0DP01 117 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 DBTP11182 482 aaKnown RBP8.12□□□□□ -1.11
CMTM3-209ENST00000565003 ZNF19P17023 458 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 ZNF20P17024 532 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 PRKACAP17612 351 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 PRKACBP22694 351 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 GABRA5P31644 462 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 CCR9P51686 369 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 EFNB2P52799 333 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 ATP1B3P54709 279 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 SNU13P55769 128 aaKnown RBP8.12□□□□□ -1.11
CMTM3-209ENST00000565003 LGALS4P56470 323 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 ACTA2P62736 377 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 ACTG2P63267 376 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 DEFA6Q01524 100 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 ZNF146Q15072 292 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 GRK1Q15835 563 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 PLA1AQ53H76 456 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 ZNF626Q68DY1 528 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 HIST2H2BDQ6DRA6 164 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 LHFPL2Q6ZUX7 228 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 KCTD20Q7Z5Y7 419 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 Q8IYB0 196 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 FAM58AQ8N1B3 248 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 OR4S1Q8NGB4 309 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 OR5D18Q8NGL1 313 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 OR13C3Q8NGS6 347 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 OR13C9Q8NGT0 318 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 SPSB1Q96BD6 273 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 OPALINQ96PE5 141 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 SPACA5Q96QH8 159 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 SLC29A1Q99808 456 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 ZNF649Q9BS31 505 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 ALG8Q9BVK2 526 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 MMP27Q9H306 513 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 ISG20L2Q9H9L3 353 aaKnown RBP8.12□□□□□ -1.11
CMTM3-209ENST00000565003 SEBOXQ9HB31 216 aaPredicted RBP8.12□□□□□ -1.11
CMTM3-209ENST00000565003 HHLA2Q9UM44 414 aa8.12□□□□□ -1.11
CMTM3-209ENST00000565003 SNTNA6NMZ2 147 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 VGLL3A8MV65 326 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 E9PI62 339 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 GABRR1P24046 479 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 PEX2P28328 305 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 OR3A1P47881 315 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 RAB13P51153 203 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 PDZK1IP1Q13113 114 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 ALKBH1Q13686 389 aaKnown RBP8.11□□□□□ -1.11
CMTM3-209ENST00000565003 GALEQ14376 348 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 SPIN3Q5JUX0 258 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 LHFPL3Q86UP9 236 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 PQLC1Q8N2U9 271 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 ZNF676Q8N7Q3 588 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 OR11H6Q8NGC7 330 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 OR4C13Q8NGP0 309 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 OR13D1Q8NGV5 346 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 RHOXF1Q8NHV9 184 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 APH1BQ8WW43 257 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 ZNF714Q96N38 554 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 C9orf16Q9BUW7 83 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 RANBP3Q9H6Z4 567 aaPredicted RBP8.11□□□□□ -1.11
CMTM3-209ENST00000565003 S100A14Q9HCY8 104 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 HMG20AQ9NP66 347 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 AMBNQ9NP70 447 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 ERVK13-1Q9NX77 482 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 GSTK1Q9Y2Q3 226 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 TBL2Q9Y4P3 447 aaKnown RBP8.11□□□□□ -1.11
CMTM3-209ENST00000565003 LINC00312Q9Y6C7 94 aa8.11□□□□□ -1.11
CMTM3-209ENST00000565003 VWFP04275 2813 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 hADV38S2A0JD32 116 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 SIRPB1O00241 398 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 MMP23AO75900 390 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 KDM4BO94953 1096 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 ZFPL1O95159 310 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 OR2H2O95918 312 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 CYB5AP00167 134 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 MT-ND2P03891 347 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 OCM2P0CE71 109 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 OCMP0CE72 109 aaPredicted RBP8.1□□□□□ -1.11
CMTM3-209ENST00000565003 JUNBP17275 347 aaPredicted RBP8.1□□□□□ -1.11
CMTM3-209ENST00000565003 KIR2DS4P43632 304 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 P2RX3P56373 397 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 MEF2CQ06413 473 aaPredicted RBP8.1□□□□□ -1.11
CMTM3-209ENST00000565003 FAM189A2Q15884 450 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 SSX2Q16385 188 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 CCBE1Q6UXH8 406 aaPredicted RBP8.1□□□□□ -1.11
CMTM3-209ENST00000565003 LIAT1Q6ZQX7 453 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 ZBTB49Q6ZSB9 765 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 SYS1Q8N2H4 156 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 OR52I1Q8NGK6 324 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 FOXRED1Q96CU9 486 aaPredicted RBP8.1□□□□□ -1.11
CMTM3-209ENST00000565003 NPFFR1Q9GZQ6 430 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 ZCCHC4Q9H5U6 513 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 ZNF702PQ9H963 129 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 RAB18Q9NP72 206 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 FOXJ3Q9UPW0 622 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 TCF19Q9Y242 345 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 SESN1Q9Y6P5 492 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 NOTCH1P46531 2555 aa8.1□□□□□ -1.11
CMTM3-209ENST00000565003 TET2Q6N021 2002 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms