RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 LYPD2Q6UXB3 125 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 ZNF841Q6ZN19 808 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 Q6ZSR3 168 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 REC114Q7Z4M0 266 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 GDPD1Q8N9F7 314 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 ZSCAN4Q8NAM6 433 aaPredicted RBP13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 BHLHE23Q8NDY6 225 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 Q8TCH9 128 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 SLC7A6Q92536 515 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 PBOV1Q9GZY1 135 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 DHDHQ9UQ10 334 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 V9GY05 133 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 LOC107986453A0A1B0GWG9 222 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 IFITM5A6NNB3 132 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 C22orf46C9J442 243 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 MLNRO43193 412 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 TSPAN15O95858 294 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 ECDO95905 644 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 IGLV3-1P01715 115 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 SFTPBP07988 381 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 IGFBP3P17936 291 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 IER3P46695 156 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 OR10A3P58181 314 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 MALLQ13021 153 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 TAF13Q15543 124 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 KRTAP27-1Q3LI81 207 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 CCDC92Q53HC0 331 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 FAM201AQ5SY85 155 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 IDNKQ5T6J7 187 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 DHRS7BQ6IAN0 325 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 PRSS45Q7RTY3 260 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 LDLRAD3Q86YD5 345 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 OR51A4Q8NGJ6 313 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 OR10AC1Q8NH08 325 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 CHPT1Q8WUD6 406 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 TSEN15Q8WW01 171 aaKnown RBP13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 LHX4Q969G2 390 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 GFI1Q99684 422 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 SRRQ9GZT4 340 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 SLC22A4Q9H015 551 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 C16orf95Q9H693 158 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 FN3KRPQ9HA64 309 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 RNF7Q9UBF6 113 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 COMMD3Q9UBI1 195 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 SPATA2Q9UM82 520 aa13.24□□□□□ -0.29
CDC42BPB-203ENST00000558867 TRAV38-1A0A0B4J264 116 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 A0A0U1RQV5 110 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 SMIM30A4D0T7 59 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 MEGF11A6BM72 1044 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 IGHV4-59P01825 116 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 APOA1P02647 267 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 ACSM4P0C7M7 580 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 CALCBP10092 127 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 MMP9P14780 707 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 ATF1P18846 271 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 IFITM3Q01628 133 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 OR8B8Q15620 311 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 ZNF79Q15937 498 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 RGS21Q2M5E4 152 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 NPRL2Q8WTW4 380 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 DIRAS2Q96HU8 199 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 TBX15Q96SF7 602 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 SDHCQ99643 169 aaPredicted RBP13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 PPP1R3EQ9H7J1 279 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 DAPK2Q9UIK4 370 aa13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 AK6Q9Y3D8 172 aaKnown RBP13.23□□□□□ -0.29
CDC42BPB-203ENST00000558867 A0A1B0GTI1 187 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 A0A1W2PPK0 400 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 FABP12A6NFH5 140 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 LGALS8O00214 317 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 ADAM20O43506 726 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 HPGDSO60760 199 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 TPPPO94811 219 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 DBHP09172 617 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 FBP1P09467 338 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 PMELP40967 661 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 CD200P41217 278 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 RANBP1P43487 201 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 SOX2P48431 317 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 CX3CR1P49238 355 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 DRAM2Q6UX65 266 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 BAIAP2L2Q6UXY1 529 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 LYSMD2Q8IV50 215 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 RDH10Q8IZV5 341 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 PLPP7Q8NBV4 271 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 SETD6Q8TBK2 473 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 TRMT10AQ8TBZ6 339 aaKnown RBP13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 ITFG2Q969R8 447 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 SPTSSAQ969W0 71 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 SP140LQ9H930 580 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 UFSP2Q9NUQ7 469 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 CKLFQ9UBR5 152 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 GTF2A1LQ9UNN4 478 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 ETV7Q9Y603 341 aa13.22□□□□□ -0.29
CDC42BPB-203ENST00000558867 TRAV8-7A0A075B6U6 113 aa13.21□□□□□ -0.29
CDC42BPB-203ENST00000558867 A0A0U1RQK1 487 aa13.21□□□□□ -0.29
CDC42BPB-203ENST00000558867 A0A1B0GWJ7 208 aa13.21□□□□□ -0.29
CDC42BPB-203ENST00000558867 CAPZA1P52907 286 aa13.21□□□□□ -0.29
CDC42BPB-203ENST00000558867 ZNF121P58317 390 aaPredicted RBP13.21□□□□□ -0.29
CDC42BPB-203ENST00000558867 ARF6P62330 175 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms