RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 DERL3Q96Q80 235 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 SLC6A7Q99884 636 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 CNTD2Q9H8S5 307 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 TMEM138Q9NPI0 162 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 NUP50Q9UKX7 468 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 TRBV5-7A0A0A0MS05 114 aa13.08□□□□□ -0.32
RABGGTA-206ENST00000558649 SIRPB1O00241 398 aa13.08□□□□□ -0.32
RABGGTA-206ENST00000558649 KDM4BO94953 1096 aa13.08□□□□□ -0.32
RABGGTA-206ENST00000558649 MAS1P04201 325 aa13.08□□□□□ -0.32
RABGGTA-206ENST00000558649 CD1AP06126 327 aa13.08□□□□□ -0.32
RABGGTA-206ENST00000558649 GABRR1P24046 479 aa13.08□□□□□ -0.32
RABGGTA-206ENST00000558649 ZNF93P35789 620 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-206ENST00000558649 TGFBR2P37173 567 aa13.08□□□□□ -0.32
RABGGTA-206ENST00000558649 PRB3Q04118 309 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-206ENST00000558649 PDZD9Q8IXQ8 264 aa13.08□□□□□ -0.32
RABGGTA-206ENST00000558649 SAXO1Q8IYX7 474 aa13.08□□□□□ -0.32
RABGGTA-206ENST00000558649 OR10K1Q8NGX5 313 aa13.08□□□□□ -0.32
RABGGTA-206ENST00000558649 TMEM203Q969S6 136 aa13.08□□□□□ -0.32
RABGGTA-206ENST00000558649 UPRTQ96BW1 309 aa13.08□□□□□ -0.32
RABGGTA-206ENST00000558649 HMG20AQ9NP66 347 aa13.08□□□□□ -0.32
RABGGTA-206ENST00000558649 NOX4Q9NPH5 578 aa13.08□□□□□ -0.32
RABGGTA-206ENST00000558649 C19orf12Q9NSK7 152 aa13.08□□□□□ -0.32
RABGGTA-206ENST00000558649 RRP9O43818 475 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 TK1P04183 234 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 CHRM2P08172 466 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 IGFBP3P17936 291 aaPredicted RBP13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 FSTP19883 344 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 MAPK3P27361 379 aaPredicted RBP13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 GABARAPL2P60520 117 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 SCN1BQ07699 218 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 EDDM3AQ14507 147 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 RSU1Q15404 277 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 C11orf91Q3C1V1 193 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 ACSM3Q53FZ2 586 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 SPIN3Q5JUX0 258 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 BRD3OSQ6XYD6 125 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 VMO1Q7Z5L0 202 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 CMTM4Q8IZR5 234 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 JAGN1Q8N5M9 183 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 ZSCAN4Q8NAM6 433 aaPredicted RBP13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 LY6G5BQ8NDX9 201 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 LHX4Q969G2 390 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 NR1H4Q96RI1 486 aaPredicted RBP13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 TBX15Q96SF7 602 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 MS4A7Q9GZW8 240 aaPredicted RBP13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 CHST6Q9GZX3 395 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 SIRPDQ9H106 197 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 EXOSC4Q9NPD3 245 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 ZNF69Q9UC07 566 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 GLS2Q9UI32 602 aa13.07□□□□□ -0.32
RABGGTA-206ENST00000558649 MEX3AA1L020 520 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 PIN1P1O15428 100 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 TCF21O43680 179 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 CDRT1O95170 752 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 ALDOBP05062 364 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 MMP9P14780 707 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 FPR2P25090 351 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 DLX1P56177 255 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 EDDM3BP56851 147 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 RPS25P62851 125 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 RPL31P62899 125 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 PDCD1Q15116 288 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 TBCEQ15813 527 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 FAM27D1Q5T7N8 215 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 GPR157Q5UAW9 335 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 RUSC1-AS1Q66K80 236 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 GDPD3Q7L5L3 318 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 BCL6BQ8N143 479 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 MS4A15Q8N5U1 240 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 C8orf46Q8TAG6 207 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 ZNF418Q8TF45 676 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 THRSPQ92748 146 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 S100A13Q99584 98 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 MGLLQ99685 303 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 SIRT7Q9NRC8 400 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 ING4Q9UNL4 249 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 KPTNQ9Y664 436 aa13.06□□□□□ -0.32
RABGGTA-206ENST00000558649 TRBV23-1A0A0A0MS06 115 aa13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 TMEM82A0PJX8 343 aa13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 K7N7A8 449 aa13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 SH2D1BO14796 132 aa13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 ZNF737O75373 536 aa13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 HTR3BO95264 441 aa13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 OR2H2O95918 312 aa13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 ZNF44P15621 663 aa13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 PTGFRP43088 359 aa13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 MLLT11Q13015 90 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 ZNF146Q15072 292 aa13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 GRK1Q15835 563 aa13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 ZNF367Q7RTV3 350 aa13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 CEACAM19Q7Z692 300 aa13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 KIR3DL3Q8N743 410 aa13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 FAM234AQ9H0X4 552 aa13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 ACOT13Q9NPJ3 140 aa13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 FOXJ3Q9UPW0 622 aa13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 SOX21Q9Y651 276 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-206ENST00000558649 PSPNO60542 156 aa13.04□□□□□ -0.32
RABGGTA-206ENST00000558649 GPX5O75715 221 aa13.04□□□□□ -0.32
RABGGTA-206ENST00000558649 SERPINA2P20848 420 aa13.04□□□□□ -0.32
RABGGTA-206ENST00000558649 MTNR1BP49286 362 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms