RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 BLOC1S6Q9UL45 172 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 PIGLQ9Y2B2 252 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 UBE2J1Q9Y385 318 aaPredicted RBP4.08□□□□□ -1.76
SPG11-208ENST00000558155 LINC00312Q9Y6C7 94 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 CDH10Q9Y6N8 788 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 A0A0U1RQV5 110 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 TMEM238LA0A1B0GVL6 79 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 TMEM269A0A1B0GVZ9 245 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 FUOMA2VDF0 154 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 RIIAD1A6NNX1 92 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 BUB1B-PAK6H3BSN5 160 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 CCRL2O00421 344 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 DLGAP1O14490 977 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 LDLRAD4O15165 306 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 FGF16O43320 207 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 EDF1O60869 148 aaKnown RBP4.07□□□□□ -1.76
SPG11-208ENST00000558155 ZNF737O75373 536 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 KRT36O76013 467 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 IGHG2P01859 326 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 RPLP1P05386 114 aaKnown RBP4.07□□□□□ -1.76
SPG11-208ENST00000558155 ELANEP08246 267 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 FRMD6-AS1P0C7T7 363 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 CLUP10909 449 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 NCK1P16333 377 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 ZNF3P17036 446 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 VEGFCP49767 419 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 ERVK11-1P61568 191 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 IL24Q13007 206 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 HES1Q14469 280 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 EDDM3AQ14507 147 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 KPNB1Q14974 876 aaKnown RBP4.07□□□□□ -1.76
SPG11-208ENST00000558155 GRK1Q15835 563 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 CLVS2Q5SYC1 327 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 TPTE2P1Q5T6R2 138 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 LINC01590Q5TEZ4 76 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 HEPN1Q6WQI6 88 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 RASSF6Q6ZTQ3 369 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 ASRGL1Q7L266 308 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 ZNF429Q86V71 674 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 COMMD2Q86X83 199 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 ENTHD1Q8IYW4 607 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 STPG2Q8N412 459 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 OR2T33Q8NG76 320 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 OTOSQ8NHW6 89 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 IL17DQ8TAD2 202 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 RPEQ96AT9 228 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 OTULINQ96BN8 352 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 RCN3Q96D15 328 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 PYURFQ96I23 114 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 HRASLS5Q96KN8 279 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 AMELYQ99218 206 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 PKIBQ9C010 78 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 GAL3ST2Q9H3Q3 398 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 SEBOXQ9HB31 216 aaPredicted RBP4.07□□□□□ -1.76
SPG11-208ENST00000558155 IL1RAPQ9NPH3 570 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 DNAJB9Q9UBS3 223 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 LINC00527Q9UJ94 153 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 SLC7A11Q9UPY5 501 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 RRP15Q9Y3B9 282 aaKnown RBP4.07□□□□□ -1.76
SPG11-208ENST00000558155 DNAH9Q9NYC9 4486 aa4.07□□□□□ -1.76
SPG11-208ENST00000558155 TRGV10A0A0A0MS01 117 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 TMEM82A0PJX8 343 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 PQLC2LA1A4F0 135 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 FAM90A18PA6NE21 464 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 FAM90A16PA6NEW6 464 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 FAM90A20PA6NIJ5 464 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 FAM90A9PA6NNJ1 464 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 FAM90A12PA8MX19 464 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 FAM90A5PA8MXJ8 464 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 LY6LH3BQJ8 138 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 AP4M1O00189 453 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 NME4O00746 187 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 MGST3O14880 152 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 MMP23AO75900 390 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 DHRS3O75911 302 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 GASTP01350 101 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 IGLV1-47P01700 117 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 IFNA6P05013 189 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 OR8U8P0C7N1 319 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 FAM90A15PP0C7V4 464 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 FAM90A13PP0C7W8 464 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 FAM90A14PP0C7W9 464 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 FAM90A24PP0C7X0 464 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 TMEM11P17152 192 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 MYF6P23409 242 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 GABRR1P24046 479 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 CDK2P24941 298 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 MPZP25189 248 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 CD34P28906 385 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 ERP29P30040 261 aaKnown RBP4.06□□□□□ -1.76
SPG11-208ENST00000558155 MNAT1P51948 309 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 HMGA2P52926 109 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 PSMA6P60900 246 aaKnown RBP4.06□□□□□ -1.76
SPG11-208ENST00000558155 ACTR3P61158 418 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 ESRRGP62508 458 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 SF3A3Q12874 501 aaKnown RBP eCLIP4.06□□□□□ -1.76
SPG11-208ENST00000558155 MRPL28Q13084 256 aaKnown RBP4.06□□□□□ -1.76
SPG11-208ENST00000558155 FOXE3Q13461 319 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 GPR50Q13585 617 aa4.06□□□□□ -1.76
SPG11-208ENST00000558155 HNF4GQ14541 408 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms