RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 CHRM2P08172 466 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 ADH4P08319 380 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 CD3GP09693 182 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 CSF3P09919 207 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 DANCRP0C864 163 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 EGR1P18146 543 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 GLRA1P23415 457 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 NR4A2P43354 598 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 GUCA2AQ02747 115 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 ZNF260Q3ZCT1 412 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 C6orf183Q5T699 404 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 RAB12Q6IQ22 244 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 Q6ZTK2 550 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 C6orf201Q7Z4U5 140 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 GDPD1Q8N9F7 314 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 POC1AQ8NBT0 407 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 OR56B1Q8NGI3 324 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 RAB3CQ96E17 227 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 DIRC2Q96SL1 478 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 ARPC5LQ9BPX5 153 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 FN3KRPQ9HA64 309 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 SAP30LQ9HAJ7 183 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 CBLN4Q9NTU7 201 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 PPP1R3CQ9UQK1 317 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 CHD3Q12873 2000 aaKnown RBP8.6□□□□□ -1.03
SRP54-208ENST00000555557 UTP20O75691 2785 aaKnown RBP8.6□□□□□ -1.03
SRP54-208ENST00000555557 ARFGEF3Q5TH69 2177 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 DCHS2Q6V1P9 2916 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 LINC00854A0A1B0GVQ3 168 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 FAM221AA4D161 298 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 FOXI3A8MTJ6 420 aaPredicted RBP8.6□□□□□ -1.03
SRP54-208ENST00000555557 UPK1BO75841 260 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 CYB5R3P00387 301 aaPredicted RBP8.6□□□□□ -1.03
SRP54-208ENST00000555557 HPXP02790 462 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 CD55P08174 381 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 PTBP1P26599 531 aaKnown RBP eCLIP8.6□□□□□ -1.038e-9■■■■□ 22.1
SRP54-208ENST00000555557 MNDAP41218 407 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 GATA4P43694 442 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 CEBPDP49716 269 aaPredicted RBP8.6□□□□□ -1.03
SRP54-208ENST00000555557 PITPNAQ00169 270 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 FAM209AQ5JX71 171 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 ATAD3CQ5T2N8 411 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 AGAP6Q5VW22 663 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 SFRP4Q6FHJ7 346 aaPredicted RBP8.6□□□□□ -1.03
SRP54-208ENST00000555557 CADM3Q8N126 398 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 GCSAMQ8N6F7 178 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 OR5T2Q8NGG2 359 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 OR52I2Q8NH67 350 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 MRPS24Q96EL2 167 aaKnown RBP8.6□□□□□ -1.03
SRP54-208ENST00000555557 THAP7Q9BT49 309 aaPredicted RBP8.6□□□□□ -1.03
SRP54-208ENST00000555557 PLEKHJ1Q9NW61 149 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 KLK11Q9UBX7 282 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 A0A0A6YYH2 397 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 A6NJ64 397 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 HSPB6O14558 160 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 NOS1APO75052 506 aaPredicted RBP8.59□□□□□ -1.03
SRP54-208ENST00000555557 IL7P13232 177 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 HIST1H1DP16402 221 aaKnown RBP8.59□□□□□ -1.03
SRP54-208ENST00000555557 TNFRSF1AP19438 455 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 CD300CQ08708 224 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 IKZF1Q13422 519 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 STEAP3Q658P3 488 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 C11orf71Q6IPW1 123 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 BAIAP2L2Q6UXY1 529 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 ACP7Q6ZNF0 438 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 NUDCD2Q8WVJ2 157 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 CCL17Q92583 94 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 DYRK2Q92630 601 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 FAAP24Q9BTP7 215 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 CCDC32Q9BV29 185 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 CACNG6Q9BXT2 260 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 PECRQ9BY49 303 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 CLEC4MQ9H2X3 399 aaPredicted RBP8.59□□□□□ -1.03
SRP54-208ENST00000555557 HES4Q9HCC6 221 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 OR14J1Q9UGF5 321 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 AKAP6Q13023 2319 aa8.59□□□□□ -1.03
SRP54-208ENST00000555557 IGHV3OR15-7A0A075B7D8 119 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 A0A1W2PQ09 198 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 UBE2QL1A1L167 161 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 ANKRD34BA5PLL1 514 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 LYNX1G3V0Z9 82 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.58□□□□□ -1.04
SRP54-208ENST00000555557 CTDSPLO15194 276 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 SCGNO76038 276 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 LY6HO94772 140 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 LHBP01229 141 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 ACAA1P09110 424 aaPredicted RBP8.58□□□□□ -1.04
SRP54-208ENST00000555557 LYNX1P0DP58 116 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 COX6B1P14854 86 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 CHATP28329 748 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 PRSS3P35030 304 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 TESK1Q15569 626 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 FAM189A2Q15884 450 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 LYSMD2Q8IV50 215 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 Q8IYB0 196 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 BPIFB2Q8N4F0 458 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 YIPF5Q969M3 257 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 NEDD4LQ96PU5 975 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 SULT4A1Q9BR01 284 aa8.58□□□□□ -1.04
SRP54-208ENST00000555557 TRAF4Q9BUZ4 470 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms