RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ZNF525Q8N782 197 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 ZNF645Q8N7E2 425 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 GATD1Q8NB37 220 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 C20orf203Q8NBC4 194 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 OR4P4Q8NGL7 312 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 OR1J4Q8NGS1 313 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 OR6K3Q8NGY3 331 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 SYNPRQ8TBG9 265 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 DCAKDQ8WVC6 231 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 TMEM158Q8WZ71 300 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 RDH5Q92781 318 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 RNF185Q96GF1 192 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 C16orf74Q96GX8 76 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 FAM19A4Q96LR4 140 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 WFIKKN1Q96NZ8 548 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 HBEGFQ99075 208 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 LINC01587Q99440 93 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 NRIP2Q9BQI9 281 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 ANAPC13Q9BS18 74 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 PAXXQ9BUH6 204 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 EMC6Q9BV81 110 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 TIPINQ9BVW5 301 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 SFXN3Q9BWM7 321 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 MRPL20Q9BYC9 149 aaKnown RBP1.6□□□□□ -2.15
SRP54-204ENST00000553923 ULBP1Q9BZM6 244 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 BCL2L14Q9BZR8 327 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 TOLLIPQ9H0E2 274 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 MS4A6AQ9H2W1 248 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 POMKQ9H5K3 350 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 ZNF702PQ9H963 129 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 RBM22Q9NW64 420 aaKnown RBP eCLIP1.6□□□□□ -2.15
SRP54-204ENST00000553923 IL17CQ9P0M4 197 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 STOML2Q9UJZ1 356 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 PSG8Q9UQ74 426 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 SLC22A13Q9Y226 551 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 ARL2BPQ9Y2Y0 163 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 NEUROG3Q9Y4Z2 214 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 CAMTA1Q9Y6Y1 1673 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 ZNF608Q9ULD9 1512 aaPredicted RBP1.6□□□□□ -2.15
SRP54-204ENST00000553923 PALLDQ8WX93 1383 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 THSD7BQ9C0I4 1608 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 POGZQ7Z3K3 1410 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 TGIF2-C20orf24A0A0A6YYL0 155 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 E5RI56 91 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 INS-IGF2F8WCM5 200 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 KCNK1O00180 336 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 PHYHO14832 338 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 ACOX3O15254 700 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 CD5LO43866 347 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 NPIPB7O75200 414 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 UGT2B11O75310 529 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 CA11O75493 328 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 DCTN3O75935 186 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 SLC22A5O76082 557 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 SLC25A14O95258 325 aaPredicted RBP1.59□□□□□ -2.15
SRP54-204ENST00000553923 CNIH1O95406 144 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 CD74P04233 296 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 FABP1P07148 127 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 ZDHHC11BP0C7U3 371 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 TDGF1P13385 188 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 TCN2P20062 427 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 CXCL5P42830 114 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 SLCO1A2P46721 670 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 CAPZBP47756 277 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 TDGF1P3P51864 188 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 OR4D2P58180 307 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 RAB14P61106 215 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 GRB2P62993 217 aaKnown RBP1.59□□□□□ -2.15
SRP54-204ENST00000553923 CRADDP78560 199 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 CDK5Q00535 292 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 TSPAN31Q12999 210 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 SRSF6Q13247 344 aaKnown RBP1.59□□□□□ -2.15
SRP54-204ENST00000553923 C1DQ13901 141 aaKnown RBP1.59□□□□□ -2.15
SRP54-204ENST00000553923 PDK2Q15119 407 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 RSU1Q15404 277 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 TAF1AQ15573 450 aaPredicted RBP1.59□□□□□ -2.15
SRP54-204ENST00000553923 SLC9A3R2Q15599 337 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 GUK1Q16774 197 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 TMEM183BQ1AE95 376 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 CLEC12BQ2HXU8 276 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 AKIRIN2Q53H80 203 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 SMUG1Q53HV7 270 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 HIST2H3PS2Q5TEC6 136 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 C1orf195Q5TG92 126 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 NXNL2Q5VZ03 156 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 LAMTOR1Q6IAA8 161 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 CEMP1Q6PRD7 247 aaPredicted RBP1.59□□□□□ -2.15
SRP54-204ENST00000553923 FAM183BPQ6ZVS7 135 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 AKAP14Q86UN6 197 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 SLC51BQ86UW2 128 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 NT5DC3Q86UY8 548 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 GID4Q8IVV7 300 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 TMEM183AQ8IXX5 376 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 STK40Q8N2I9 435 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 C14orf178Q8N769 122 aaPredicted RBP1.59□□□□□ -2.15
SRP54-204ENST00000553923 ACBD4Q8NC06 268 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 OR4M2Q8NGB6 313 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 OR4M1Q8NGD0 313 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 OR51D1Q8NGF3 324 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms