RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 H3BUX3 64 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 EBAG9O00559 213 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 WIPF1O43516 503 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 CHST1O43916 411 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 TSPAN9O75954 239 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 CLIC3O95833 236 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 HAND1O96004 215 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 MT-ND2P03891 347 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 CHRM2P08172 466 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 OR3A1P47881 315 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 GTF2A1P52655 376 aaPredicted RBP10.56□□□□□ -0.72
NPAS3-209ENST00000551008 MTCP1P56278 107 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 ZP1P60852 638 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 ACTA2P62736 377 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 ACTG2P63267 376 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 PDZK1IP1Q13113 114 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 BLMHQ13867 455 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 ZNF146Q15072 292 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 GDPGP1Q6ZNW5 385 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 TPRX1Q8N7U7 411 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 OR4S1Q8NGB4 309 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 OR13C9Q8NGT0 318 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 SPSB1Q96BD6 273 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 SNX22Q96L94 193 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 OPALINQ96PE5 141 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 SSX3Q99909 188 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 PDCD1LG2Q9BQ51 273 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 JAM3Q9BX67 310 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 FGF20Q9NP95 211 aaPredicted RBP10.56□□□□□ -0.72
NPAS3-209ENST00000551008 PLA2G2EQ9NZK7 142 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 CAB39Q9Y376 341 aaPredicted RBP10.56□□□□□ -0.72
NPAS3-209ENST00000551008 RNF114Q9Y508 228 aa10.56□□□□□ -0.72
NPAS3-209ENST00000551008 TET2Q6N021 2002 aaPredicted RBP10.55□□□□□ -0.72
NPAS3-209ENST00000551008 MMP23AO75900 390 aa10.55□□□□□ -0.72
NPAS3-209ENST00000551008 ZNF728P0DKX0 622 aa10.55□□□□□ -0.72
NPAS3-209ENST00000551008 JUNBP17275 347 aaPredicted RBP10.55□□□□□ -0.72
NPAS3-209ENST00000551008 PRKACAP17612 351 aa10.55□□□□□ -0.72
NPAS3-209ENST00000551008 PRKACBP22694 351 aa10.55□□□□□ -0.72
NPAS3-209ENST00000551008 ATP1B3P54709 279 aa10.55□□□□□ -0.72
NPAS3-209ENST00000551008 RAB40BQ12829 278 aa10.55□□□□□ -0.72
NPAS3-209ENST00000551008 DOC2BQ14184 412 aa10.55□□□□□ -0.72
NPAS3-209ENST00000551008 ZNF529Q6P280 563 aa10.55□□□□□ -0.72
NPAS3-209ENST00000551008 BAIAP2L2Q6UXY1 529 aa10.55□□□□□ -0.72
NPAS3-209ENST00000551008 LHFPL2Q6ZUX7 228 aa10.55□□□□□ -0.72
NPAS3-209ENST00000551008 FAM58AQ8N1B3 248 aa10.55□□□□□ -0.72
NPAS3-209ENST00000551008 OR5D18Q8NGL1 313 aa10.55□□□□□ -0.72
NPAS3-209ENST00000551008 OR13C3Q8NGS6 347 aa10.55□□□□□ -0.72
NPAS3-209ENST00000551008 CHST6Q9GZX3 395 aa10.55□□□□□ -0.72
NPAS3-209ENST00000551008 HMG20AQ9NP66 347 aa10.55□□□□□ -0.72
NPAS3-209ENST00000551008 SIRT4Q9Y6E7 314 aaPredicted RBP10.55□□□□□ -0.72
NPAS3-209ENST00000551008 PRKDCP78527 4128 aaKnown RBP10.54□□□□□ -0.72
NPAS3-209ENST00000551008 KCNAB3O43448 404 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 MPZL2O60487 215 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 KDM4BO94953 1096 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 PAHP00439 452 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 LALBAP00709 142 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 SERPINA3P01011 423 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 RBP4P02753 201 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 IGHV1-8P0DP01 117 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 ZNF20P17024 532 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 ETV1P50549 477 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 SNU13P55769 128 aaKnown RBP10.54□□□□□ -0.72
NPAS3-209ENST00000551008 EDDM3BP56851 147 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 IL18R1Q13478 541 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 EDDM3AQ14507 147 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 LY6EQ16553 131 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 LRRC75BQ2VPJ9 315 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 ZNF626Q68DY1 528 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 DHRS7BQ6IAN0 325 aaPredicted RBP10.54□□□□□ -0.72
NPAS3-209ENST00000551008 Q6P435 159 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 TREML4Q6UXN2 200 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 Q8IYB0 196 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 PARP16Q8N5Y8 322 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 ZNF676Q8N7Q3 588 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 OR51A2Q8NGJ7 313 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 OR5R1Q8NH85 324 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 CNIH3Q8TBE1 160 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 NKX3-1Q99801 234 aaPredicted RBP10.54□□□□□ -0.72
NPAS3-209ENST00000551008 COMMD4Q9H0A8 199 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 PPA2Q9H2U2 334 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 HEXA-AS1Q9H8Q6 139 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 INPP5EQ9NRR6 644 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 SMPD3Q9NY59 655 aaPredicted RBP10.54□□□□□ -0.72
NPAS3-209ENST00000551008 SIGLEC9Q9Y336 463 aa10.54□□□□□ -0.72
NPAS3-209ENST00000551008 SNTNA6NMZ2 147 aa10.53□□□□□ -0.72
NPAS3-209ENST00000551008 SIRPB1O00241 398 aa10.53□□□□□ -0.72
NPAS3-209ENST00000551008 ALX3O95076 343 aa10.53□□□□□ -0.72
NPAS3-209ENST00000551008 BAG2O95816 211 aa10.53□□□□□ -0.72
NPAS3-209ENST00000551008 FADS2O95864 444 aaKnown RBP10.53□□□□□ -0.72
NPAS3-209ENST00000551008 OR2H2O95918 312 aa10.53□□□□□ -0.72
NPAS3-209ENST00000551008 PEX2P28328 305 aa10.53□□□□□ -0.72
NPAS3-209ENST00000551008 GDNFP39905 211 aa10.53□□□□□ -0.72
NPAS3-209ENST00000551008 ADARB1P78563 741 aaKnown RBP10.53□□□□□ -0.72
NPAS3-209ENST00000551008 MEF2CQ06413 473 aaPredicted RBP10.53□□□□□ -0.72
NPAS3-209ENST00000551008 CDK5R1Q15078 307 aa10.53□□□□□ -0.72
NPAS3-209ENST00000551008 GRK1Q15835 563 aa10.53□□□□□ -0.72
NPAS3-209ENST00000551008 AANATQ16613 207 aa10.53□□□□□ -0.72
NPAS3-209ENST00000551008 ZSCAN26Q16670 478 aa10.53□□□□□ -0.72
NPAS3-209ENST00000551008 UTF1Q5T230 341 aa10.53□□□□□ -0.72
NPAS3-209ENST00000551008 OR2G6Q5TZ20 316 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms