RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 ZNF561Q8N587 486 aa12.5□□□□□ -0.41
CD9-210ENST00000543916 NKAIN3Q8N8D7 197 aa12.5□□□□□ -0.41
CD9-210ENST00000543916 PNLDC1Q8NA58 520 aaKnown RBP12.5□□□□□ -0.41
CD9-210ENST00000543916 TMEM185AQ8NFB2 350 aa12.5□□□□□ -0.41
CD9-210ENST00000543916 RAB40AQ8WXH6 277 aa12.5□□□□□ -0.41
CD9-210ENST00000543916 FAHD2AQ96GK7 314 aa12.5□□□□□ -0.41
CD9-210ENST00000543916 NUDT16L1Q9BRJ7 211 aaKnown RBP12.5□□□□□ -0.41
CD9-210ENST00000543916 CNTD2Q9H8S5 307 aa12.5□□□□□ -0.41
CD9-210ENST00000543916 RHOFQ9HBH0 211 aa12.5□□□□□ -0.41
CD9-210ENST00000543916 SLC25A10Q9UBX3 287 aaPredicted RBP12.5□□□□□ -0.41
CD9-210ENST00000543916 ING4Q9UNL4 249 aa12.5□□□□□ -0.41
CD9-210ENST00000543916 GSTK1Q9Y2Q3 226 aa12.5□□□□□ -0.41
CD9-210ENST00000543916 ANK3Q12955 4377 aaKnown RBP12.49□□□□□ -0.41
CD9-210ENST00000543916 TRIM64CA6NLI5 447 aa12.49□□□□□ -0.41
CD9-210ENST00000543916 ARL6IP5O75915 188 aa12.49□□□□□ -0.41
CD9-210ENST00000543916 HAND1O96004 215 aa12.49□□□□□ -0.41
CD9-210ENST00000543916 GATA3P23771 443 aa12.49□□□□□ -0.41
CD9-210ENST00000543916 CALRP27797 417 aaKnown RBP12.49□□□□□ -0.41
CD9-210ENST00000543916 CAV3P56539 151 aa12.49□□□□□ -0.41
CD9-210ENST00000543916 FGF12P61328 243 aa12.49□□□□□ -0.41
CD9-210ENST00000543916 COL10A1Q03692 680 aa12.49□□□□□ -0.41
CD9-210ENST00000543916 RSU1Q15404 277 aa12.49□□□□□ -0.41
CD9-210ENST00000543916 SPIN3Q5JUX0 258 aa12.49□□□□□ -0.41
CD9-210ENST00000543916 CD276Q5ZPR3 534 aa12.49□□□□□ -0.41
CD9-210ENST00000543916 ELP2Q6IA86 826 aa12.49□□□□□ -0.41
CD9-210ENST00000543916 CDH26Q8IXH8 852 aa12.49□□□□□ -0.41
CD9-210ENST00000543916 OR4D6Q8NGJ1 314 aa12.49□□□□□ -0.41
CD9-210ENST00000543916 GFI1Q99684 422 aa12.49□□□□□ -0.41
CD9-210ENST00000543916 SEBOXQ9HB31 216 aaPredicted RBP12.49□□□□□ -0.41
CD9-210ENST00000543916 IL36GQ9NZH8 169 aa12.49□□□□□ -0.41
CD9-210ENST00000543916 OPN4Q9UHM6 478 aa12.49□□□□□ -0.41
CD9-210ENST00000543916 RPUSD1Q9UJJ7 312 aaKnown RBP12.49□□□□□ -0.41
CD9-210ENST00000543916 MRPS28Q9Y2Q9 187 aaKnown RBP12.49□□□□□ -0.41
CD9-210ENST00000543916 MTORP42345 2549 aa12.48□□□□□ -0.41
CD9-210ENST00000543916 FN1P02751 2386 aaKnown RBP12.48□□□□□ -0.41
CD9-210ENST00000543916 KIR2DS1A0A191URI9 304 aa12.48□□□□□ -0.41
CD9-210ENST00000543916 TRDV1A0A1B0GX56 115 aa12.48□□□□□ -0.41
CD9-210ENST00000543916 MEGF11A6BM72 1044 aa12.48□□□□□ -0.41
CD9-210ENST00000543916 J3QLI3 93 aa12.48□□□□□ -0.41
CD9-210ENST00000543916 ENSAO43768 121 aaKnown RBP12.48□□□□□ -0.41
CD9-210ENST00000543916 ZNF737O75373 536 aa12.48□□□□□ -0.41
CD9-210ENST00000543916 CRLF1O75462 422 aa12.48□□□□□ -0.41
CD9-210ENST00000543916 NDUFB7P17568 137 aa12.48□□□□□ -0.41
CD9-210ENST00000543916 MTNR1BP49286 362 aa12.48□□□□□ -0.41
CD9-210ENST00000543916 CAPZA1P52907 286 aa12.48□□□□□ -0.41
CD9-210ENST00000543916 FIP1L1Q6UN15 594 aaKnown RBP12.48□□□□□ -0.41
CD9-210ENST00000543916 ASCC1Q8N9N2 400 aaKnown RBP12.48□□□□□ -0.41
CD9-210ENST00000543916 Q8NFD4 153 aa12.48□□□□□ -0.41
CD9-210ENST00000543916 H1FXQ92522 213 aaKnown RBP12.48□□□□□ -0.41
CD9-210ENST00000543916 C1orf147Q96MC9 270 aaPredicted RBP12.48□□□□□ -0.41
CD9-210ENST00000543916 NR1H4Q96RI1 486 aaPredicted RBP12.48□□□□□ -0.41
CD9-210ENST00000543916 DCTN5Q9BTE1 182 aa12.48□□□□□ -0.41
CD9-210ENST00000543916 SHARPINQ9H0F6 387 aa12.48□□□□□ -0.41
CD9-210ENST00000543916 SLITRK2Q9H156 845 aa12.48□□□□□ -0.41
CD9-210ENST00000543916 METTL9Q9H1A3 318 aa12.48□□□□□ -0.41
CD9-210ENST00000543916 C7orf69Q9H7B7 122 aa12.48□□□□□ -0.41
CD9-210ENST00000543916 NIPBLQ6KC79 2804 aaeCLIP12.47□□□□□ -0.41
CD9-210ENST00000543916 HIVEP2P31629 2446 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 A0A1W2PP11 408 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 SHISA3A0PJX4 238 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 TMEM82A0PJX8 343 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 SIRPB1O00241 398 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 GPR37O15354 613 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 HTR3BO95264 441 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 ECDO95905 644 aaPredicted RBP12.47□□□□□ -0.41
CD9-210ENST00000543916 TK1P04183 234 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 CHRM2P08172 466 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 SMIM18P0DKX4 95 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 CD37P11049 281 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 SERPINA2P20848 420 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 GALP22466 123 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 PAX8Q06710 450 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 PDCD1Q15116 288 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 C11orf91Q3C1V1 193 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 PIGYQ3MUY2 71 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 C1orf100Q5SVJ3 147 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 C22orf42Q6IC83 251 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 GLIPR1L1Q6UWM5 242 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 BTNL3Q6UXE8 466 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 C17orf107Q6ZR85 190 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 LY6G5BQ8NDX9 201 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 OR51T1Q8NGJ9 327 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 S100A13Q99584 98 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 UQCC2Q9BRT2 126 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 EXOSC4Q9NPD3 245 aaKnown RBP12.47□□□□□ -0.41
CD9-210ENST00000543916 CDC42EP3Q9UKI2 254 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 STUB1Q9UNE7 303 aa12.47□□□□□ -0.41
CD9-210ENST00000543916 SVEP1Q4LDE5 3571 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 K7N7A8 449 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 SH2D1BO14796 132 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 PSPNO60542 156 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 OR2H2O95918 312 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 JUNBP17275 347 aaPredicted RBP12.46□□□□□ -0.41
CD9-210ENST00000543916 HNF1AP20823 631 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 BMXP51813 675 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 SLC22A6Q4U2R8 563 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 GLT8D1Q68CQ7 371 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 AWAT2Q6E213 333 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 Q6P435 159 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 OSR2Q8N2R0 312 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms