RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 ANKRD13BQ86YJ7 626 aa14.63□□□□□ -0.07
CLSTN3-210ENST00000540931 OSR2Q8N2R0 312 aa14.63□□□□□ -0.07
CLSTN3-210ENST00000540931 ORAI1Q96D31 301 aa14.63□□□□□ -0.07
CLSTN3-210ENST00000540931 SSBP3Q9BWW4 388 aaPredicted RBP14.63□□□□□ -0.07
CLSTN3-210ENST00000540931 WDR13Q9H1Z4 485 aa14.63□□□□□ -0.07
CLSTN3-210ENST00000540931 OR51E2Q9H255 320 aa14.63□□□□□ -0.07
CLSTN3-210ENST00000540931 FUOMA2VDF0 154 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 RFPL4AA6NLU0 287 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 NOTOA8MTQ0 251 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 RFPL4AL1F8VTS6 287 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 ANGPTL7O43827 346 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 NOL3O60936 208 aaKnown RBP14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 GYPAP02724 150 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 TFAP2AP05549 437 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 BCL3P20749 454 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 GABRA2P47869 451 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 OR3A4PP47883 348 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 CAV3P56539 151 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 RAB11BQ15907 218 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 MPV17LQ2QL34 196 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 GLIPR1L1Q6UWM5 242 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 OR2W3Q7Z3T1 314 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 FUNDC2Q9BWH2 189 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 PPIL3Q9H2H8 161 aaKnown RBP14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 NARFLQ9H6Q4 476 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 OR5V1Q9UGF6 321 aa14.62□□□□□ -0.07
CLSTN3-210ENST00000540931 A0A1W2PPH5 198 aa14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 AIPO00170 330 aa14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 WNT9BO14905 357 aa14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 ZNF205O95201 554 aa14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 HTR3BO95264 441 aa14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 MSMBP08118 114 aa14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 ARSBP15848 533 aa14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 ADRA2CP18825 462 aa14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 KCNJ3P48549 501 aa14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 FAM201AQ5SY85 155 aa14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 CRIP3Q6Q6R5 217 aa14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 GLCCI1Q86VQ1 547 aa14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 IFT22Q9H7X7 185 aa14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 RBFOX1Q9NWB1 397 aaKnown RBP14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 FBLN5Q9UBX5 448 aa14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 LPAR3Q9UBY5 353 aa14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 STEAP1Q9UHE8 339 aa14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 AK6Q9Y3D8 172 aaKnown RBP14.61□□□□□ -0.07
CLSTN3-210ENST00000540931 NSD1Q96L73 2696 aaPredicted RBP14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 IGKV1D-17A0A075B6S4 117 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 IGKV1-12A0A0C4DH73 117 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 IFITM5A6NNB3 132 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 SMAD7O15105 426 aaKnown RBP14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 HAND1O96004 215 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 IL1AP01583 271 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 IGKV1D-12P01611 117 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 GLAP06280 429 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 SFTPBP07988 381 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 LMO1P25800 156 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 NPBWR2P48146 333 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 DVL1P1P54792 670 aaPredicted RBP14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 GMFBP60983 142 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 SLC22A6Q4U2R8 563 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 FAM166AQ6J272 317 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 BTNL3Q6UXE8 466 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 RAB2BQ8WUD1 216 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 PTX4Q96A99 478 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 SNX22Q96L94 193 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 ZNF488Q96MN9 340 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 URM1Q9BTM9 101 aaKnown RBP14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 OR14J1Q9UGF5 321 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 ZNF222Q9UK12 451 aa14.6□□□□□ -0.07
CLSTN3-210ENST00000540931 IGHV3OR15-7A0A075B7D8 119 aa14.59□□□□□ -0.07
CLSTN3-210ENST00000540931 TRBV23-1A0A0A0MS06 115 aa14.59□□□□□ -0.07
CLSTN3-210ENST00000540931 J3QLI3 93 aa14.59□□□□□ -0.07
CLSTN3-210ENST00000540931 DVL1O14640 695 aa14.59□□□□□ -0.07
CLSTN3-210ENST00000540931 DEGS1O15121 323 aa14.59□□□□□ -0.07
CLSTN3-210ENST00000540931 CD5LO43866 347 aa14.59□□□□□ -0.07
CLSTN3-210ENST00000540931 SCGNO76038 276 aa14.59□□□□□ -0.07
CLSTN3-210ENST00000540931 CDRT1O95170 752 aa14.59□□□□□ -0.07
CLSTN3-210ENST00000540931 SERPINA2P20848 420 aa14.59□□□□□ -0.07
CLSTN3-210ENST00000540931 TMBIM6P55061 237 aa14.59□□□□□ -0.07
CLSTN3-210ENST00000540931 WDR25Q64LD2 544 aaPredicted RBP14.59□□□□□ -0.07
CLSTN3-210ENST00000540931 OR5T2Q8NGG2 359 aa14.59□□□□□ -0.07
CLSTN3-210ENST00000540931 OR4D6Q8NGJ1 314 aa14.59□□□□□ -0.07
CLSTN3-210ENST00000540931 CCL13Q99616 98 aa14.59□□□□□ -0.07
CLSTN3-210ENST00000540931 SLC25A10Q9UBX3 287 aaPredicted RBP14.59□□□□□ -0.07
CLSTN3-210ENST00000540931 ST3GAL6Q9Y274 331 aa14.59□□□□□ -0.07
CLSTN3-210ENST00000540931 JMJD1CQ15652 2540 aa14.58□□□□□ -0.07
CLSTN3-210ENST00000540931 A0A0G2JMP0 313 aa14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 A0A0X1KG70 313 aa14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 K7N7A8 449 aa14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 ENSAO43768 121 aaKnown RBP14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 CRTAPO75718 401 aaPredicted RBP14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 GABARAPO95166 117 aa14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 CSN2P05814 226 aa14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 IGHV4-31P0DP07 118 aa14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 ZNF44P15621 663 aa14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 SDC2P34741 201 aa14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 RBM11P57052 281 aaKnown RBP14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 RBM39Q14498 530 aaKnown RBP14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 USP43Q70EL4 1123 aa14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 C1QL2Q7Z5L3 287 aa14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 C19orf18Q8NEA5 215 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms