RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CHAF1BQ13112 559 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 EXT1Q16394 746 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 SNAI3Q3KNW1 292 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 SP6Q3SY56 376 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 AKIRIN2Q53H80 203 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 MRPL14Q6P1L8 145 aaKnown RBP11.51□□□□□ -0.57
UBE3B-209ENST00000539584 SLC22A25Q6T423 547 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 DPPA3Q6W0C5 159 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 ZNF565Q8N9K5 539 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 SUMF2Q8NBJ7 301 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 OR10AD1Q8NGE0 317 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 OR1F12Q8NHA8 337 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 FBXO17Q96EF6 278 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 GNPNAT1Q96EK6 184 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-209ENST00000539584 CYYR1Q96J86 154 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 TMEM56Q96MV1 263 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 PLEKHF2Q9H8W4 249 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 LHX6Q9UPM6 363 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 TMEM56-RWDD3S4R434 201 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 FAM230AA0A1W2PPH8 454 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 CXorf65A6NEN9 183 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 TIAF1O95411 115 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 DIRAS3O95661 229 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 LIFP15018 202 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 OPRM1P35372 400 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 RRADP55042 308 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 EWSR1Q01844 656 aaKnown RBP eCLIP11.5□□□□□ -0.57
UBE3B-209ENST00000539584 BAXQ07812 192 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 HIKESHIQ53FT3 197 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 ETV3LQ6ZN32 361 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 WDR5BQ86VZ2 330 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 PPP1R3BQ86XI6 285 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 FBXL14Q8N1E6 418 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 OR52M1Q8NGK5 317 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 CPT1CQ8TCG5 803 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 CD300LFQ8TDQ1 290 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 PAPOLGQ9BWT3 736 aaKnown RBP11.5□□□□□ -0.57
UBE3B-209ENST00000539584 C11orf1Q9H5F2 150 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 GSN-AS1Q9NRJ2 163 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 KIAA1456Q9P272 454 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 RCL1Q9Y2P8 373 aaKnown RBP11.5□□□□□ -0.57
UBE3B-209ENST00000539584 CCDC187A0A096LP49 1063 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 C3orf85A0A1B0GTC6 90 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 A0A1W2PPH5 198 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 CLEC18AA5D8T8 446 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 A6NLC8 198 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 TRDCB7Z8K6 153 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 MPPED1O15442 326 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 PHF1O43189 567 aaPredicted RBP11.5□□□□□ -0.57
UBE3B-209ENST00000539584 DBHP09172 617 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 FUT3P21217 361 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 FXYD4P59646 89 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 RAB2AP61019 212 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 PCBD1P61457 104 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 ZIC4Q8N9L1 334 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 CLEC18CQ8NCF0 446 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 Q8NFD4 153 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 TMEM222Q9H0R3 208 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 NIT2Q9NQR4 276 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 ST3GAL6Q9Y274 331 aa11.5□□□□□ -0.57
UBE3B-209ENST00000539584 IGKV1-27A0A075B6S5 117 aa11.49□□□□□ -0.57
UBE3B-209ENST00000539584 OR6C6A6NF89 314 aa11.49□□□□□ -0.57
UBE3B-209ENST00000539584 ANGPTL7O43827 346 aa11.49□□□□□ -0.57
UBE3B-209ENST00000539584 CBR3O75828 277 aa11.49□□□□□ -0.57
UBE3B-209ENST00000539584 KLK2P20151 261 aa11.49□□□□□ -0.57
UBE3B-209ENST00000539584 NKX2-1P43699 371 aaPredicted RBP11.49□□□□□ -0.57
UBE3B-209ENST00000539584 RAC3P60763 192 aa11.49□□□□□ -0.57
UBE3B-209ENST00000539584 NHLH2Q02577 135 aa11.49□□□□□ -0.57
UBE3B-209ENST00000539584 FOXO1Q12778 655 aa11.49□□□□□ -0.57
UBE3B-209ENST00000539584 PHLDA2Q53GA4 152 aa11.49□□□□□ -0.57
UBE3B-209ENST00000539584 DMRTC1Q5HYR2 192 aa11.49□□□□□ -0.57
UBE3B-209ENST00000539584 RAET1LQ5VY80 246 aa11.49□□□□□ -0.57
UBE3B-209ENST00000539584 FAM24BQ8N5W8 94 aa11.49□□□□□ -0.57
UBE3B-209ENST00000539584 SLC35G3Q8N808 338 aa11.49□□□□□ -0.57
UBE3B-209ENST00000539584 HSD17B11Q8NBQ5 300 aa11.49□□□□□ -0.57
UBE3B-209ENST00000539584 FAM213BQ8TBF2 198 aa11.49□□□□□ -0.57
UBE3B-209ENST00000539584 RBMXL1Q96E39 390 aaKnown RBP11.49□□□□□ -0.57
UBE3B-209ENST00000539584 PARP12Q9H0J9 701 aaKnown RBP11.49□□□□□ -0.57
UBE3B-209ENST00000539584 LYRM2Q9NU23 88 aaPredicted RBP11.49□□□□□ -0.57
UBE3B-209ENST00000539584 ZDHHC8Q9ULC8 765 aa11.49□□□□□ -0.57
UBE3B-209ENST00000539584 RBFOX3A6NFN3 312 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 ZNF732B4DXR9 585 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 GEMIN2O14893 280 aaKnown RBP11.48□□□□□ -0.57
UBE3B-209ENST00000539584 XRCC2O43543 280 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 SPRY1O43609 319 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-209ENST00000539584 PPYP01298 95 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 HBE1P02100 147 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 LCATP04180 440 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 AKR1C3P42330 323 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 PCOLCEQ15113 449 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 OR8G1Q15617 311 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 PRAMEF20Q5VT98 475 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 ADAM5Q6NVV9 412 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 HEPN1Q6WQI6 88 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 DTX1Q86Y01 620 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 OR5L1Q8NGL2 311 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 M1APQ8TC57 530 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 ISOC2Q96AB3 205 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 BSCL2Q96G97 398 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-209ENST00000539584 YPEL4Q96NS1 127 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms