RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 PPIAL4EA0A075B759 164 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 hCG_1807616A0A1W2PRN6 198 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 CEACAM18A8MTB9 384 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 PPIAL4DF5H284 164 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 IFNL4K9M1U5 179 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 IGHV2-5P01817 119 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 SFTPBP07988 381 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 ACAA1P09110 424 aaPredicted RBP10.84□□□□□ -0.67
CCDC42-202ENST00000539522 PPIAL4FP0DN26 164 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 ARSBP15848 533 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 ELK1P19419 428 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 USF1P22415 310 aaPredicted RBP10.84□□□□□ -0.67
CCDC42-202ENST00000539522 TALDO1P37837 337 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 OR3A4PP47883 348 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 ATP1B3P54709 279 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 CLDN12P56749 244 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 GMFBP60983 142 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 P2RY14Q15391 338 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 UBE2NLQ5JXB2 153 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 STUMQ69YW2 141 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 ASCL4Q6XD76 172 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 ZNF841Q6ZN19 808 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 ZNF573Q86YE8 665 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 PNLDC1Q8NA58 520 aaKnown RBP10.84□□□□□ -0.67
CCDC42-202ENST00000539522 DEFB108BQ8NET1 73 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 OR51D1Q8NGF3 324 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 OR5T2Q8NGG2 359 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 OR5H6Q8NGV6 325 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 RAB40AQ8WXH6 277 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 S100A16Q96FQ6 103 aaKnown RBP10.84□□□□□ -0.67
CCDC42-202ENST00000539522 GPER1Q99527 375 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 SOSTQ9BQB4 213 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 ABCG5Q9H222 651 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 CNTD2Q9H8S5 307 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 GHRLQ9UBU3 117 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 METRNQ9UJH8 293 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 PPIAL4AQ9Y536 164 aa10.84□□□□□ -0.67
CCDC42-202ENST00000539522 CUBNO60494 3623 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 IGKV1D-17A0A075B6S4 117 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 A0A0B4J203 849 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 OOEPA6NGQ2 149 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 KIAA1324LA8MWY0 1029 aaPredicted RBP10.83□□□□□ -0.68
CCDC42-202ENST00000539522 LGALS8O00214 317 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 SMAD7O15105 426 aaKnown RBP10.83□□□□□ -0.68
CCDC42-202ENST00000539522 TPPPO94811 219 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 BPNT1O95861 308 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 GYPAP02724 150 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 UBBP0CG47 229 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 IGHV4-31P0DP07 118 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 SELLP14151 372 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 BCL3P20749 454 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 CEBPDP49716 269 aaPredicted RBP10.83□□□□□ -0.68
CCDC42-202ENST00000539522 DCTN2Q13561 401 aaKnown RBP10.83□□□□□ -0.68
CCDC42-202ENST00000539522 TMEM155Q4W5P6 130 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 CNIH2Q6PI25 160 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 ACP7Q6ZNF0 438 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 OR4D6Q8NGJ1 314 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 OR11L1Q8NGX0 322 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 ANGPTL6Q8NI99 470 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 LGALS14Q8TCE9 139 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 HPS1Q92902 700 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 RAB1CQ92928 201 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 PTX4Q96A99 478 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 RBFOX1Q9NWB1 397 aaKnown RBP10.83□□□□□ -0.68
CCDC42-202ENST00000539522 ZNF581Q9P0T4 197 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 RAB22AQ9UL26 194 aa10.83□□□□□ -0.68
CCDC42-202ENST00000539522 MED13LQ71F56 2210 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 A0A1W2PP11 408 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 LRRC30A6NM36 301 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 KDM4BO94953 1096 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 EIF4EP06730 217 aaKnown RBP10.82□□□□□ -0.68
CCDC42-202ENST00000539522 WNT2P09544 360 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 PSG2P11465 335 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 ZFP36P26651 326 aaKnown RBP10.82□□□□□ -0.68
CCDC42-202ENST00000539522 MDH2P40926 338 aaKnown RBP10.82□□□□□ -0.68
CCDC42-202ENST00000539522 PTGFRP43088 359 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 POU3F4P49335 361 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 FAM189A2Q15884 450 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 TMEM249Q2WGJ8 235 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 FAM131AQ6UXB0 335 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 BAIAP2L2Q6UXY1 529 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 CMTM4Q8IZR5 234 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 CD177Q8N6Q3 437 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 Q8NFD4 153 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 ZNF665Q9H7R5 613 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 PATZ1Q9HBE1 687 aaKnown RBP10.82□□□□□ -0.68
CCDC42-202ENST00000539522 PALMDQ9NP74 551 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 EXTL2Q9UBQ6 330 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 FBLN5Q9UBX5 448 aa10.82□□□□□ -0.68
CCDC42-202ENST00000539522 MRPS28Q9Y2Q9 187 aaKnown RBP10.82□□□□□ -0.68
CCDC42-202ENST00000539522 F8P00451 2351 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 LDLRAD4O15165 306 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 RAB6AP20340 208 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 GLRA1P23415 457 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 PITPNBP48739 271 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 PITPNAQ00169 270 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 PAX2Q02962 417 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 AWAT2Q6E213 333 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 C16orf87Q6PH81 154 aa10.81□□□□□ -0.68
CCDC42-202ENST00000539522 GLIPR1L1Q6UWM5 242 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms