RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 B8ZZF3 427 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 F5H0A9 414 aaPredicted RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 H7C1Q1 480 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 SDCBPO00560 298 aaPredicted RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 TAAR5O14804 337 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 GEMIN2O14893 280 aaKnown RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 OR7C1O76099 320 aaPredicted RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 DIRAS3O95661 229 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 HLA-HP01893 362 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 RLN2P04090 185 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 CTXN2P0C2S0 81 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 RPS2P15880 293 aaKnown RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 SELEP16581 610 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 CCNOP22674 350 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 TUBG1P23258 451 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 EIF2S3P41091 472 aaKnown RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 TNFSF10P50591 281 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 UBE2NP61088 152 aaKnown RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 GNG3P63215 75 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 SUPT4H1P63272 117 aaKnown RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 SNTB1Q13884 538 aaKnown RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 RBM39Q14498 530 aaKnown RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 SLC9A3R2Q15599 337 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 PIGYQ3MUY2 71 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 LRRC37A5PQ49AS3 106 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 EIF5AL1Q6IS14 154 aaKnown RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 RGS7BPQ6MZT1 257 aaPredicted RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 SLC22A25Q6T423 547 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 DHRS11Q6UWP2 260 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 IGFL2Q6UWQ7 119 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 ALKAL2Q6UX46 152 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 SLC25A26Q70HW3 274 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 HSD17B13Q7Z5P4 300 aaPredicted RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 RTN4RL2Q86UN3 420 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 Q8IYB0 196 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 POC1AQ8NBT0 407 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 C1orf162Q8NEQ5 155 aaPredicted RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 SLC39A7Q92504 469 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 MOB3AQ96BX8 217 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 GALNT14Q96FL9 552 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 SEC22AQ96IW7 307 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 AQP10Q96PS8 301 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 SULT4A1Q9BR01 284 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 FAAP24Q9BTP7 215 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 ZNF471Q9BX82 626 aaPredicted RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 TUBG2Q9NRH3 451 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 SDHAF2Q9NX18 166 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 RASL12Q9NYN1 266 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 RCC2Q9P258 522 aaKnown RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 ZNF230Q9UIE0 474 aaPredicted RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 GPR160Q9UJ42 338 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 PTPRBP23467 1997 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 MYO15AQ9UKN7 3530 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 IGKV1-12A0A0C4DH73 117 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 DUXBA0A1W2PPF3 345 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 LRP5LA4QPB2 252 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 MFSD2BA6NFX1 497 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 ZNF891A8MT65 544 aaPredicted RBP5.71□□□□□ -1.5
USP28-206ENST00000538224 F8VVB4 439 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 F8VWA3 439 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 J3QT63 122 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 AQP7O14520 342 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 TSPAN9O75954 239 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 KNG1P01042 644 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 IGKV1D-12P01611 117 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 S100A6P06703 90 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 SFTPBP07988 381 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 S100GP29377 79 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 HOXC12P31275 282 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 PTGER4P35408 488 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 MDH2P40926 338 aaKnown RBP5.71□□□□□ -1.5
USP28-206ENST00000538224 HAAOP46952 286 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 LUMP51884 338 aaPredicted RBP5.71□□□□□ -1.5
USP28-206ENST00000538224 IL24Q13007 206 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 ATXN7L3Q14CW9 347 aaPredicted RBP5.71□□□□□ -1.5
USP28-206ENST00000538224 TGIF1Q15583 401 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 GABRA6Q16445 453 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 ANKRD55Q3KP44 614 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 PAN3Q58A45 887 aaKnown RBP5.71□□□□□ -1.5
USP28-206ENST00000538224 C9orf135Q5VTT2 229 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 OR2A2Q6IF42 318 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 INO80CQ6PI98 192 aaPredicted RBP5.71□□□□□ -1.5
USP28-206ENST00000538224 FBXW12Q6X9E4 464 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 MOB1BQ7L9L4 216 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 C1orf174Q8IYL3 243 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 LRTM2Q8N967 370 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 DEFB124Q8NES8 71 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 SLC30A7Q8NEW0 376 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 MAFIPQ8WZ33 124 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 BCL2L2Q92843 193 aaPredicted RBP5.71□□□□□ -1.5
USP28-206ENST00000538224 EXTL1Q92935 676 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 SARAFQ96BY9 339 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 SPIN2AQ99865 258 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 MICU1Q9BPX6 476 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 SPIN2BQ9BPZ2 258 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 RTL8AQ9BWD3 113 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 SHARPINQ9H0F6 387 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 DEFB127Q9H1M4 99 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 ZNF552Q9H707 407 aaPredicted RBP5.71□□□□□ -1.5
USP28-206ENST00000538224 NAA60Q9H7X0 242 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms