RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 MALLQ13021 153 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 FAM76BQ5HYJ3 339 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 BATF2Q8N1L9 274 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 LRTM2Q8N967 370 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 MSI2Q96DH6 328 aaKnown RBP12.39□□□□□ -0.43
USP44-203ENST00000537435 GPR35Q9HC97 309 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 KIAA1549Q9HCM3 1950 aa12.39□□□□□ -0.43
USP44-203ENST00000537435 ZNF587BE7ETH6 402 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 DVL1P1P54792 670 aaPredicted RBP12.38□□□□□ -0.43
USP44-203ENST00000537435 CLDN15P56746 228 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 PCBD1P61457 104 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 OR8B8Q15620 311 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 Q6ZPA2 131 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 OR52M1Q8NGK5 317 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 GLYATL2Q8WU03 294 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 MOB3AQ96BX8 217 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 KIRREL1Q96J84 757 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 SYT3Q9BQG1 590 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 WFDC1Q9HC57 220 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 ZNF816-ZNF321PA0A0X1KG74 233 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 FAM157AC9JC47 383 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 PHF1O43189 567 aaPredicted RBP12.38□□□□□ -0.43
USP44-203ENST00000537435 EDN3P14138 238 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 GLP1RP43220 463 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 DUSP3P51452 185 aaPredicted RBP12.38□□□□□ -0.43
USP44-203ENST00000537435 RBM11P57052 281 aaKnown RBP12.38□□□□□ -0.43
USP44-203ENST00000537435 RIPPLY2Q5TAB7 128 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 PPP1R32Q7Z5V6 425 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 CALHM1Q8IU99 346 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 LGI3Q8N145 548 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 LYPD6BQ8NI32 183 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 ABHD3Q8WU67 409 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 ZNF845Q96IR2 970 aaPredicted RBP12.38□□□□□ -0.43
USP44-203ENST00000537435 ARV1Q9H2C2 271 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 ZNF442Q9H7R0 627 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 FAM212BQ9NTI7 297 aaPredicted RBP12.38□□□□□ -0.43
USP44-203ENST00000537435 STARD10Q9Y365 291 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 KLF2Q9Y5W3 355 aaPredicted RBP12.38□□□□□ -0.43
USP44-203ENST00000537435 POMT1Q9Y6A1 747 aa12.38□□□□□ -0.43
USP44-203ENST00000537435 GPR137BO60478 399 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 HEXAP06865 529 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 AADACP22760 399 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 FBXW12Q6X9E4 464 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 DEPPQ9NTK1 212 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 OR7C1O76099 320 aaPredicted RBP12.37□□□□□ -0.43
USP44-203ENST00000537435 IGHV3-9P01782 118 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 DUSP1P28562 367 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 HOXA6P31267 233 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 RAB13P51153 203 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 UCP3P55916 312 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 HERV-K104P61576 105 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 ZNF528Q3MIS6 628 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 WDR5BQ86VZ2 330 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 ZNF611Q8N823 705 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 RXFP4Q8TDU9 374 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 AKR1E2Q96JD6 320 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 P4HTMQ9NXG6 502 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 ZDHHC8Q9ULC8 765 aa12.37□□□□□ -0.43
USP44-203ENST00000537435 VPS13AQ96RL7 3174 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 TMEM265A0A087WTH1 108 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 BORCS7-ASMTA0A0B4J1R7 106 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 F10P00742 488 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 IGHEP01854 428 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 CRYBA1P05813 215 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 FUT3P21217 361 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 GDF1P27539 372 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 NPBWR2P48146 333 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 TMEM211Q6ICI0 200 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 SLC25A26Q70HW3 274 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 SECTM1Q8WVN6 248 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 FBXO9Q9UK97 447 aaPredicted RBP12.36□□□□□ -0.43
USP44-203ENST00000537435 MEX3AA1L020 520 aaKnown RBP12.36□□□□□ -0.43
USP44-203ENST00000537435 PINLYPA6NC86 204 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 NME2P1O60361 137 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 TSPAN15O95858 294 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 MMP7P09237 267 aaPredicted RBP12.36□□□□□ -0.43
USP44-203ENST00000537435 SEC11BP0C7V7 166 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 P2RY1P47900 373 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 NOVA1P51513 510 aaKnown RBP12.36□□□□□ -0.43
USP44-203ENST00000537435 AKR1D1P51857 326 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 IL13RA2Q14627 380 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 DAZAP2Q15038 168 aaPredicted RBP12.36□□□□□ -0.43
USP44-203ENST00000537435 PEA15Q15121 130 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 MIDNQ504T8 468 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 AKIRIN2Q53H80 203 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 ACER2Q5QJU3 275 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 GPR157Q5UAW9 335 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 MEX3BQ6ZN04 569 aaKnown RBP12.36□□□□□ -0.43
USP44-203ENST00000537435 CCDC71LQ8N9Z2 235 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 CPEB3Q8NE35 698 aaKnown RBP12.36□□□□□ -0.43
USP44-203ENST00000537435 TP53RKQ96S44 253 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 RSRP1Q9BUV0 290 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 PARPBPQ9NWS1 579 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 TCFL5Q9UL49 500 aa12.36□□□□□ -0.43
USP44-203ENST00000537435 RCL1Q9Y2P8 373 aaKnown RBP12.36□□□□□ -0.43
USP44-203ENST00000537435 ST8SIA3O43173 380 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 CYTIPO60759 359 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 PPYP01298 95 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 DANCRP0C864 163 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 RPL35P42766 123 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms