RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 FAM71F1Q96KD3 344 aaPredicted RBP15.68■□□□□ 0.1
RAB40C-203ENST00000535977 SIRT7Q9NRC8 400 aa15.68■□□□□ 0.1
RAB40C-203ENST00000535977 TMED3Q9Y3Q3 217 aa15.68■□□□□ 0.1
RAB40C-203ENST00000535977 SDK1Q7Z5N4 2213 aa15.68■□□□□ 0.1
RAB40C-203ENST00000535977 CYTIPO60759 359 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 RAMP1O60894 148 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 PTBP3O95758 552 aaKnown RBP15.67■□□□□ 0.1
RAB40C-203ENST00000535977 MPIG6BO95866 241 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 ARL6IP1Q15041 203 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 C5orf24Q7Z6I8 188 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 MARCH1Q8TCQ1 289 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 SSC4DQ8WTU2 575 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 Q8WTZ3 238 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 PACRGQ96M98 296 aaPredicted RBP15.67■□□□□ 0.1
RAB40C-203ENST00000535977 GPER1Q99527 375 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 FBXO7Q9Y3I1 522 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 IGLV3-1P01715 115 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 LIFP15018 202 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 ZNF17P17021 662 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 THBS4P35443 961 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 S100A10P60903 97 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 SLC9A3R2Q15599 337 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 HOGA1Q86XE5 327 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 TERB2Q8NHR7 220 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 PHF3Q92576 2039 aaKnown RBP15.67■□□□□ 0.1
RAB40C-203ENST00000535977 OR10C1Q96KK4 312 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 C1orf147Q96MC9 270 aaPredicted RBP15.67■□□□□ 0.1
RAB40C-203ENST00000535977 SLC35B3Q9H1N7 401 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 AKIRIN1Q9H9L7 192 aaPredicted RBP15.67■□□□□ 0.1
RAB40C-203ENST00000535977 ZNF160Q9HCG1 818 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.67■□□□□ 0.1
RAB40C-203ENST00000535977 DNAJB11Q9UBS4 358 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 HS3ST3B1Q9Y662 390 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 GJE1A6NN92 205 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 NPIPA2E9PIF3 369 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 NPIPA3F8WFD2 350 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 FOXRED2Q8IWF2 684 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 PP6455Q8WZ26 134 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 ZNF319Q9P2F9 582 aa15.67■□□□□ 0.1
RAB40C-203ENST00000535977 PTRH2Q9Y3E5 179 aaKnown RBP15.67■□□□□ 0.1
RAB40C-203ENST00000535977 COX6A1P12074 109 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 RAB4AP20338 218 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 RTL6Q6ICC9 239 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 OR2T2Q6IF00 324 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 Q6ZSR3 168 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 ZNF664Q8N3J9 261 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 TMEM104Q8NE00 496 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 URGCP-MRPS24S4R325 110 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 VPS13AQ96RL7 3174 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 PI4KAP42356 2102 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 CEACAM18A8MTB9 384 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 NTN3O00634 580 aaPredicted RBP15.66■□□□□ 0.1
RAB40C-203ENST00000535977 DNPH1O43598 174 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 TRGC2P03986 189 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 UMODP07911 640 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 UCP2P55851 309 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 HIST1H3AP68431 136 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 ELOBQ15370 118 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 FAM89BQ8N5H3 189 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 COMMD1Q8N668 190 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 SMIM3Q9BZL3 60 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 SH2D2AQ9NP31 389 aa15.66■□□□□ 0.1
RAB40C-203ENST00000535977 SOX15O60248 233 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 OR3A4PP47883 348 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 FHITP49789 147 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 SUCLG1P53597 346 aaKnown RBP15.65■□□□□ 0.1
RAB40C-203ENST00000535977 AKR1C8PQ5T2L2 129 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 NOL4LQ96MY1 436 aaPredicted RBP15.65■□□□□ 0.1
RAB40C-203ENST00000535977 NICN1Q9BSH3 213 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 OR10A2Q9H208 303 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 GSKIPQ9P0R6 139 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 DKKL1Q9UK85 242 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 V9GYS6 101 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 DHHO43323 396 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 CBR3O75828 277 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 IGHEP01854 428 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 RAC1P63000 192 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 PPA1Q15181 289 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 TMEM128Q5BJH2 165 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 BEND2Q8NDZ0 799 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 OR2Y1Q8NGV0 311 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 DDA1Q9BW61 102 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 CNTNAP3Q9BZ76 1288 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 RAB18Q9NP72 206 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 FBXL17Q9UF56 701 aa15.65■□□□□ 0.1
RAB40C-203ENST00000535977 A0A0A6YYD4 124 aa15.64■□□□□ 0.09
RAB40C-203ENST00000535977 TGIF2-C20orf24A0A0A6YYL0 155 aa15.64■□□□□ 0.09
RAB40C-203ENST00000535977 SMCO3A2RU48 225 aa15.64■□□□□ 0.09
RAB40C-203ENST00000535977 ZIC3O60481 467 aa15.64■□□□□ 0.09
RAB40C-203ENST00000535977 CRTAPO75718 401 aaPredicted RBP15.64■□□□□ 0.09
RAB40C-203ENST00000535977 ZNF25P17030 456 aaPredicted RBP15.64■□□□□ 0.09
RAB40C-203ENST00000535977 ZFP36L1Q07352 338 aaKnown RBP15.64■□□□□ 0.09
RAB40C-203ENST00000535977 RAET1LQ5VY80 246 aa15.64■□□□□ 0.09
RAB40C-203ENST00000535977 TMEM156Q8N614 296 aa15.64■□□□□ 0.09
RAB40C-203ENST00000535977 SF3B5Q9BWJ5 86 aaKnown RBP15.64■□□□□ 0.09
RAB40C-203ENST00000535977 SOCS1O15524 211 aa15.64■□□□□ 0.09
RAB40C-203ENST00000535977 CA11O75493 328 aa15.64■□□□□ 0.09
RAB40C-203ENST00000535977 KLF7O75840 302 aaPredicted RBP15.64■□□□□ 0.09
RAB40C-203ENST00000535977 DHRS3O75911 302 aa15.64■□□□□ 0.09
RAB40C-203ENST00000535977 CFIP05156 583 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms