RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 RBFOX3A6NFN3 312 aa13.9□□□□□ -0.18
MCF2L-232ENST00000535094 E9PLN8 166 aa13.9□□□□□ -0.18
MCF2L-232ENST00000535094 SRSF10O75494 262 aaKnown RBP13.9□□□□□ -0.18
MCF2L-232ENST00000535094 FAM3AP98173 230 aa13.9□□□□□ -0.18
MCF2L-232ENST00000535094 ZNF266Q14584 549 aa13.9□□□□□ -0.18
MCF2L-232ENST00000535094 ZNF774Q6NX45 483 aa13.9□□□□□ -0.18
MCF2L-232ENST00000535094 SLC25A26Q70HW3 274 aa13.9□□□□□ -0.18
MCF2L-232ENST00000535094 SLC35G3Q8N808 338 aa13.9□□□□□ -0.18
MCF2L-232ENST00000535094 CYB561D1Q8N8Q1 229 aa13.9□□□□□ -0.18
MCF2L-232ENST00000535094 DOK5Q9P104 306 aa13.9□□□□□ -0.18
MCF2L-232ENST00000535094 IGHV1OR21-1A0A087WYE8 117 aa13.9□□□□□ -0.19
MCF2L-232ENST00000535094 ELLP55199 621 aaPredicted RBP13.9□□□□□ -0.19
MCF2L-232ENST00000535094 DLK1P80370 383 aa13.9□□□□□ -0.19
MCF2L-232ENST00000535094 ZNF610Q8N9Z0 462 aa13.9□□□□□ -0.19
MCF2L-232ENST00000535094 LILRA5A6NI73 299 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 TP53I11O14683 189 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 EFNA2O43921 213 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 OR8U8P0C7N1 319 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 GABRA4P48169 554 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 ZNF133P52736 654 aaPredicted RBP13.89□□□□□ -0.19
MCF2L-232ENST00000535094 SPEM2Q0P670 501 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 TESK1Q15569 626 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 MRGPRX4Q96LA9 322 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 PLA2G2EQ9NZK7 142 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 KCNS2Q9ULS6 477 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 ADAM20O43506 726 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 TRGC2P03986 189 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 PGA4P0DJD7 388 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 PGA3P0DJD8 388 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 AADACP22760 399 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 EWSR1Q01844 656 aaKnown RBP eCLIP13.89□□□□□ -0.19
MCF2L-232ENST00000535094 SRYQ05066 204 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 NSUN5P2Q63ZY6 315 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 SHDQ96IW2 340 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 GAB2Q9UQC2 676 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 TIMM10BQ9Y5J6 103 aa13.89□□□□□ -0.19
MCF2L-232ENST00000535094 TGIF2-C20orf24A0A0A6YYL0 155 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 DHHO43323 396 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 TK1P04183 234 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 P2RY1P47900 373 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 SNAI3Q3KNW1 292 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 CXorf66Q5JRM2 361 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-232ENST00000535094 NAT6Q93015 286 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 MVB12AQ96EY5 273 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 CDCA3Q99618 268 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-232ENST00000535094 RARRES3Q9UL19 164 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 MASP2O00187 686 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 NRASP01111 189 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 HEXAP06865 529 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 SERPINE2P07093 398 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 DANCRP0C864 163 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 NR2C1P13056 603 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 IDH3GP51553 393 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-232ENST00000535094 SHBQ15464 509 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 IZUMO4Q1ZYL8 232 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-232ENST00000535094 INTS12Q96CB8 462 aaKnown RBP13.88□□□□□ -0.19
MCF2L-232ENST00000535094 MRPL38Q96DV4 380 aaKnown RBP13.88□□□□□ -0.19
MCF2L-232ENST00000535094 PMS2P1A4D2B8 440 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 CXorf65A6NEN9 183 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 CEBPZOSA8MTT3 80 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 TRAF3IP2O43734 574 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-232ENST00000535094 IAPPP10997 89 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 RPS16P62249 146 aaKnown RBP13.88□□□□□ -0.19
MCF2L-232ENST00000535094 ZNF154Q13106 437 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 B3GAT1Q9P2W7 334 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 STRAPQ9Y3F4 350 aaKnown RBP13.88□□□□□ -0.19
MCF2L-232ENST00000535094 CACNA1GO43497 2377 aa13.88□□□□□ -0.19
MCF2L-232ENST00000535094 IGKV3D-11A0A0A0MRZ8 115 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 ZNF587BE7ETH6 402 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 LMO7DNF2Z398 122 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 GAPDHP04406 335 aaKnown RBP13.87□□□□□ -0.19
MCF2L-232ENST00000535094 SEC11BP0C7V7 166 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 CCR5P51681 352 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 ADIRFQ15847 76 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 MPV17LQ2QL34 196 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 LIAT1Q6ZQX7 453 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 BEND4Q6ZU67 534 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 YRDCQ86U90 279 aaKnown RBP13.87□□□□□ -0.19
MCF2L-232ENST00000535094 METTL1Q9UBP6 276 aaKnown RBP13.87□□□□□ -0.19
MCF2L-232ENST00000535094 POMT1Q9Y6A1 747 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 CCDC187A0A096LP49 1063 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 S100GP29377 79 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 GALNSP34059 522 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 THBS4P35443 961 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 GFI1BQ5VTD9 330 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 LILRB2Q8N423 598 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 HPSE2Q8WWQ2 592 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 PP6455Q8WZ26 134 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 ZNF837Q96EG3 531 aaPredicted RBP13.87□□□□□ -0.19
MCF2L-232ENST00000535094 ZNF845Q96IR2 970 aaPredicted RBP13.87□□□□□ -0.19
MCF2L-232ENST00000535094 SNX22Q96L94 193 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 BCO1Q9HAY6 547 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 CRYM-AS1A6NIL9 109 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 UBE2CO00762 179 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 TNFSF11O14788 317 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 CELA2AP08217 269 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 DYNLT3P51808 116 aa13.87□□□□□ -0.19
MCF2L-232ENST00000535094 RPS23P62266 143 aaKnown RBP13.87□□□□□ -0.19
MCF2L-232ENST00000535094 TMEM267Q0VDI3 215 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms