RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 GNG8Q9UK08 70 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 EXOGQ9Y2C4 368 aaKnown RBP8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 TRBV2A0A0J9YWF9 115 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 EI24O14681 340 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 XPNPEP2O43895 674 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 CHST1O43916 411 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 PSPNO60542 156 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 SERPINA3P01011 423 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 MT-ND2P03891 347 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 IGHV1-8P0DP01 117 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 ATF1P18846 271 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 ATP6V1E1P36543 226 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 RBP2P50120 134 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 ALDH3A2P51648 485 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 CCR9P51686 369 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 ATP1B3P54709 279 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 OR12D2P58182 307 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 HERPUD1Q15011 391 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 CNN3Q15417 329 aaKnown RBP8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 LY6EQ16553 131 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 DEFB121Q5J5C9 76 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 MEDAGQ5VYS4 303 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 C11orf88Q6PI97 169 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 ZNF782Q6ZMW2 699 aaPredicted RBP8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 EGFL6Q8IUX8 553 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 Q8IYB0 196 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 ENTHD1Q8IYW4 607 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 Q8N2B8 174 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 ASCC1Q8N9N2 400 aaKnown RBP8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 OR52N4Q8NGI2 321 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 MALSU1Q96EH3 234 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 PELI1Q96FA3 418 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 ADI1Q9BV57 179 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 CDCA4Q9BXL8 241 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 RAB18Q9NP72 206 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 RBFOX1Q9NWB1 397 aaKnown RBP8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 SIGLEC9Q9Y336 463 aa8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 TBL2Q9Y4P3 447 aaKnown RBP8.12□□□□□ -1.11
CLSTN3-203ENST00000534830 IGKV1-12A0A0C4DH73 117 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 OR4C45A6NMZ5 311 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 SLC16A6O15403 523 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 CIB2O75838 187 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 HAND1O96004 215 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 IGKV1D-12P01611 117 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 IGHA1P01876 353 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 PIPP12273 146 aaPredicted RBP8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 BCL3P20749 454 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 COX7A1P24310 79 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 LMO1P25800 156 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 ERP29P30040 261 aaKnown RBP8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 GABRA5P31644 462 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 DYNLT3P51808 116 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 LGALS4P56470 323 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 EDDM3BP56851 147 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 ACTC1P68032 377 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 ACTA1P68133 377 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 PDZK1IP1Q13113 114 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 KPNB1Q14974 876 aaKnown RBP8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 FOXB2Q5VYV0 432 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 ZFP1Q6P2D0 407 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 LHFPL2Q6ZUX7 228 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 GDPD3Q7L5L3 318 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 RNF144BQ7Z419 303 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 FAM220AQ7Z4H9 259 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 FAM58AQ8N1B3 248 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 OR51A4Q8NGJ6 313 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 OR13D1Q8NGV5 346 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 OR10AC1Q8NH08 325 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 WIPF2Q8TF74 440 aaPredicted RBP8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 EMG1Q92979 244 aaKnown RBP8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 FGGYQ96C11 551 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 RNFT2Q96EX2 444 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 ZNF714Q96N38 554 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 FOXJ3Q9UPW0 622 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 LINC00312Q9Y6C7 94 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 DNAH9Q9NYC9 4486 aa8.11□□□□□ -1.11
CLSTN3-203ENST00000534830 hADV38S2A0JD32 116 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 DAPL1A0PJW8 107 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 A6NDX4 124 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 KDM4BO94953 1096 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 INMTO95050 263 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 ARG1P05089 322 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 HTR1AP08908 422 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 PRKACBP22694 351 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 AZGP1P25311 298 aaKnown RBP8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 PEX2P28328 305 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 OR3A1P47881 315 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 RAB13P51153 203 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 MTCP1P56278 107 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 CD69Q07108 199 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 ALKBH1Q13686 389 aaKnown RBP8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 GALEQ14376 348 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 ZIK1Q3SY52 487 aaPredicted RBP8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 SPIN3Q5JUX0 258 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 ACBD7Q8N6N7 88 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 OR4S1Q8NGB4 309 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 RHOXF1Q8NHV9 184 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 CORO2AQ92828 525 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 SPSB1Q96BD6 273 aa8.1□□□□□ -1.11
CLSTN3-203ENST00000534830 LGALS12Q96DT0 336 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms