RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 VPS13CQ709C8 3753 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 ISPDA4D126 451 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 RFPL4AA6NLU0 287 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 RFPL4AL1F8VTS6 287 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 MPIG6BO95866 241 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 AMY2BP19961 511 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 PRDX2P32119 198 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 CEBPDP49716 269 aaPredicted RBP9.95□□□□□ -0.82
COMMD9-208ENST00000533643 EFNB2P52799 333 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 CAPZA1P52907 286 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 RBM11P57052 281 aaKnown RBP9.95□□□□□ -0.82
COMMD9-208ENST00000533643 RPS27AP62979 156 aaKnown RBP9.95□□□□□ -0.82
COMMD9-208ENST00000533643 ZNF146Q15072 292 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 PDCD1Q15116 288 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 KCNJ8Q15842 424 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 TMEM155Q4W5P6 130 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 SPIN3Q5JUX0 258 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 ATPAF1Q5TC12 328 aaPredicted RBP9.95□□□□□ -0.82
COMMD9-208ENST00000533643 Q6P435 159 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 METAP1DQ6UB28 335 aaPredicted RBP9.95□□□□□ -0.82
COMMD9-208ENST00000533643 FIP1L1Q6UN15 594 aaKnown RBP9.95□□□□□ -0.82
COMMD9-208ENST00000533643 LYPD2Q6UXB3 125 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 MUC20Q8N307 709 aaPredicted RBP9.95□□□□□ -0.82
COMMD9-208ENST00000533643 CD177Q8N6Q3 437 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 KCTD12Q96CX2 325 aaKnown RBP9.95□□□□□ -0.82
COMMD9-208ENST00000533643 Q96M66 194 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 CCL13Q99616 98 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 DCUN1D5Q9BTE7 237 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 SEBOXQ9HB31 216 aaPredicted RBP9.95□□□□□ -0.82
COMMD9-208ENST00000533643 ZNF581Q9P0T4 197 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 ABRACLQ9P1F3 81 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 OR14J1Q9UGF5 321 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 RAB22AQ9UL26 194 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 ST3GAL6Q9Y274 331 aa9.95□□□□□ -0.82
COMMD9-208ENST00000533643 A0A0A6YYD4 124 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 CEACAM18A8MTB9 384 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 SH2D1BO14796 132 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 GEMIN2O14893 280 aaKnown RBP9.94□□□□□ -0.82
COMMD9-208ENST00000533643 NDUFA2O43678 99 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 HAND1O96004 215 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 SLC25A16P16260 332 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 RAB6AP20340 208 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 SOX6P35712 828 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 GABRA2P47869 451 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 SCAND1P57086 179 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 DYNC1I2Q13409 638 aaKnown RBP9.94□□□□□ -0.82
COMMD9-208ENST00000533643 IL13RA2Q14627 380 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 TAF9Q16594 264 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 ZNF788Q6ZQV5 615 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 DCDC5Q6ZRR9 648 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 BIVMQ86UB2 503 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 FAM89BQ8N5H3 189 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 ACOT12Q8WYK0 555 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 PTX4Q96A99 478 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 SLC25A38Q96DW6 304 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 SDSLQ96GA7 329 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 Q96MF0 132 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 GAFA1Q96PS6 74 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 MRI1Q9BV20 369 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 TM2D1Q9BX74 207 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 TMEM59Q9BXS4 323 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 SLIRPQ9GZT3 109 aaKnown RBP9.94□□□□□ -0.82
COMMD9-208ENST00000533643 LPAR5Q9H1C0 372 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 NARFLQ9H6Q4 476 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 METRNQ9UJH8 293 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 SPATA2Q9UM82 520 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 ETV7Q9Y603 341 aa9.94□□□□□ -0.82
COMMD9-208ENST00000533643 A0A096LNT2 108 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 IGHV4-61A0A0C4DH41 118 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 A0A1B0GW55 424 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 CYSRT1A8MQ03 144 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 DEGS1O15121 323 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 ADAM20O43506 726 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 OR2H2O95918 312 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 DUX4L2P0CJ85 424 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 DUX4L3P0CJ86 424 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 DUX4L4P0CJ87 422 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 DUX4L5P0CJ88 424 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 DUX4L6P0CJ89 424 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 DUX4L7P0CJ90 424 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 LMO4P61968 165 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 COL10A1Q03692 680 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 SCN1BQ07699 218 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 IKZF1Q13422 519 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 SIGIRRQ6IA17 410 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 DUX4L9Q6RFH8 374 aaPredicted RBP9.93□□□□□ -0.82
COMMD9-208ENST00000533643 LINC00596Q86U02 117 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 SPICQ8N5J4 248 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 WFDC11Q8NEX6 87 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 CLDND2Q8NHS1 167 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 POM121Q96HA1 1249 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 GAL3ST1Q99999 423 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 NICN1Q9BSH3 213 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 NXF2Q9GZY0 626 aaKnown RBP9.93□□□□□ -0.82
COMMD9-208ENST00000533643 DNTTIP1Q9H147 329 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 PATZ1Q9HBE1 687 aaKnown RBP9.93□□□□□ -0.82
COMMD9-208ENST00000533643 COMMD3Q9UBI1 195 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 DUX4Q9UBX2 424 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 GLS2Q9UI32 602 aa9.93□□□□□ -0.82
COMMD9-208ENST00000533643 ITGB1BP2Q9UKP3 347 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms