RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 OR5M11Q96RB7 305 aa10.02□□□□□ -0.81
CAPN1-223ENST00000533079 PAPOLGQ9BWT3 736 aaKnown RBP10.02□□□□□ -0.81
CAPN1-223ENST00000533079 NAA50Q9GZZ1 169 aaKnown RBP10.02□□□□□ -0.81
CAPN1-223ENST00000533079 WDR13Q9H1Z4 485 aa10.02□□□□□ -0.81
CAPN1-223ENST00000533079 SNTG1Q9NSN8 517 aa10.02□□□□□ -0.81
CAPN1-223ENST00000533079 NLKQ9UBE8 527 aa10.02□□□□□ -0.81
CAPN1-223ENST00000533079 CLEC2DQ9UHP7 191 aa10.02□□□□□ -0.81
CAPN1-223ENST00000533079 MPC1Q9Y5U8 109 aa10.02□□□□□ -0.81
CAPN1-223ENST00000533079 U3KQK5 164 aa10.02□□□□□ -0.81
CAPN1-223ENST00000533079 A0A1W2PRX2 142 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 MYL12BO14950 172 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 SYNGR1O43759 233 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 APOC1P02654 83 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 AZGP1P25311 298 aaKnown RBP10.01□□□□□ -0.81
CAPN1-223ENST00000533079 ETV1P50549 477 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 ERVFRD-1P60508 538 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 GRB2P62993 217 aaKnown RBP10.01□□□□□ -0.81
CAPN1-223ENST00000533079 ACTC1P68032 377 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 ACTA1P68133 377 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 MED22Q15528 200 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 TAF13Q15543 124 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 LCN1P1Q5VSP4 162 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 DCXRQ7Z4W1 244 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 SDR9C7Q8NEX9 313 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 TMEM185AQ8NFB2 350 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 BBS1Q8NFJ9 593 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 OR5AU1Q8NGC0 362 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 OR52H1Q8NGJ2 320 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 OR4K13Q8NH42 304 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 MALSU1Q96EH3 234 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 REEP6Q96HR9 211 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 OPALINQ96PE5 141 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 RGCCQ9H4X1 137 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 ERVK13-1Q9NX77 482 aa10.01□□□□□ -0.81
CAPN1-223ENST00000533079 NOTCH3Q9UM47 2321 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 OR6C68A6NDL8 312 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 FAM183AA6NL82 134 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 H3BUI4 141 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 TBX1O43435 398 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 OR2T7P0C7T2 308 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 SLC2A1P11166 492 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 CPEP16870 476 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 GALP22466 123 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 PAX6P26367 422 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 ATP6V1E1P36543 226 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 PRKXP51817 358 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 BLVRAP53004 296 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 DOC2BQ14184 412 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 GALEQ14376 348 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 FAM76BQ5HYJ3 339 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 TMPRSS11AQ6ZMR5 421 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 OR4X2Q8NGF9 303 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 OR2T4Q8NH00 348 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 OR2T27Q8NH04 317 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 SLAMF6Q96DU3 332 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 SDSLQ96GA7 329 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 MNTQ99583 582 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 MCRIP2Q9BUT9 160 aaKnown RBP10□□□□□ -0.81
CAPN1-223ENST00000533079 ELL3Q9HB65 397 aaPredicted RBP10□□□□□ -0.81
CAPN1-223ENST00000533079 ZNF222Q9UK12 451 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 A3GALT2U3KPV4 340 aa10□□□□□ -0.81
CAPN1-223ENST00000533079 IGKV1D-17A0A075B6S4 117 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 AKR7A2O43488 359 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 AIREO43918 545 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 ZFPL1O95159 310 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 ANXA2P07355 339 aaKnown RBP9.99□□□□□ -0.81
CAPN1-223ENST00000533079 SPI1P17947 270 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 GLRA1P23415 457 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 PSMA1P25786 263 aaKnown RBP9.99□□□□□ -0.81
CAPN1-223ENST00000533079 HSD11B1P28845 292 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 HOXD3P31249 432 aaPredicted RBP9.99□□□□□ -0.81
CAPN1-223ENST00000533079 RPS27P42677 84 aaKnown RBP9.99□□□□□ -0.81
CAPN1-223ENST00000533079 GABRA2P47869 451 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 CX3CR1P49238 355 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 GSK3AP49840 483 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 GMFBP60983 142 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 RPL31P62899 125 aaKnown RBP9.99□□□□□ -0.81
CAPN1-223ENST00000533079 KLHL12Q53G59 568 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 C16orf82Q7Z2V1 217 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 RNF144BQ7Z419 303 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 TMEM219Q86XT9 240 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 CALHM1Q8IU99 346 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 LINC00482Q8N8I6 264 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 ZNRF1Q8ND25 227 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 OR5P3Q8WZ94 311 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 RPL3LQ92901 407 aaKnown RBP9.99□□□□□ -0.81
CAPN1-223ENST00000533079 MRPL48Q96GC5 212 aaKnown RBP9.99□□□□□ -0.81
CAPN1-223ENST00000533079 OR51V1Q9H2C8 321 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 MED20Q9H944 212 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 ADGRL4Q9HBW9 690 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 C19orf12Q9NSK7 152 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 NDUFB11Q9NX14 153 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 BABAM2Q9NXR7 383 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 RHBDD3Q9Y3P4 386 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 RYR2Q92736 4967 aa9.99□□□□□ -0.81
CAPN1-223ENST00000533079 EPPK1P58107 5090 aaKnown RBP9.98□□□□□ -0.81
CAPN1-223ENST00000533079 TCRBV4S1A1TA0A5B7 111 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 DAPL1A0PJW8 107 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 ODF3BA8MYP8 253 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 RBP4P02753 201 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms