RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 DHDHQ9UQ10 334 aa13.75□□□□□ -0.21
PKP3-209ENST00000533069 CEPT1Q9Y6K0 416 aa13.75□□□□□ -0.21
PKP3-209ENST00000533069 LOC107986453A0A1B0GWG9 222 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 NOS1APO75052 506 aaPredicted RBP13.74□□□□□ -0.21
PKP3-209ENST00000533069 OCM2P0CE71 109 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 PGA5P0DJD9 388 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 PSG2P11465 335 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 GADD45AP24522 165 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 MPZP25189 248 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 RANBP1P43487 201 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 CAV3P56539 151 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 ARF6P62330 175 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 RPS25P62851 125 aaKnown RBP13.74□□□□□ -0.21
PKP3-209ENST00000533069 DGUOKQ16854 277 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 ODF4Q2M2E3 257 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 ACSM3Q53FZ2 586 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 DMRTC1Q5HYR2 192 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 UNQ9370/PRO34162Q6UXP9 181 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 BRD3OSQ6XYD6 125 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 FGFRL1Q8N441 504 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 C8orf46Q8TAG6 207 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 TSEN15Q8WW01 171 aaKnown RBP13.74□□□□□ -0.21
PKP3-209ENST00000533069 SLC25A28Q96A46 364 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 ISOC1Q96CN7 298 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 KCTD7Q96MP8 289 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 PKIBQ9C010 78 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 CHST5Q9GZS9 411 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 SLITRK2Q9H156 845 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 PRDM13Q9H4Q3 707 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 EXOSC4Q9NPD3 245 aaKnown RBP13.74□□□□□ -0.21
PKP3-209ENST00000533069 CKLFQ9UBR5 152 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 ZNF222Q9UK12 451 aa13.74□□□□□ -0.21
PKP3-209ENST00000533069 IGKV1D-17A0A075B6S4 117 aa13.73□□□□□ -0.21
PKP3-209ENST00000533069 CENPVL3A0A0U1RRI6 287 aa13.73□□□□□ -0.21
PKP3-209ENST00000533069 HAX1O00165 279 aa13.73□□□□□ -0.21
PKP3-209ENST00000533069 GABRPO00591 440 aa13.73□□□□□ -0.21
PKP3-209ENST00000533069 RNASE1P07998 156 aaKnown RBP13.73□□□□□ -0.21
PKP3-209ENST00000533069 SELLP14151 372 aa13.73□□□□□ -0.21
PKP3-209ENST00000533069 GABRA2P47869 451 aa13.73□□□□□ -0.21
PKP3-209ENST00000533069 ACP7Q6ZNF0 438 aa13.73□□□□□ -0.21
PKP3-209ENST00000533069 SLC16A12Q6ZSM3 486 aa13.73□□□□□ -0.21
PKP3-209ENST00000533069 PP6455Q8WZ26 134 aa13.73□□□□□ -0.21
PKP3-209ENST00000533069 H1FXQ92522 213 aaKnown RBP13.73□□□□□ -0.21
PKP3-209ENST00000533069 TMEM203Q969S6 136 aa13.73□□□□□ -0.21
PKP3-209ENST00000533069 SDSLQ96GA7 329 aa13.73□□□□□ -0.21
PKP3-209ENST00000533069 C1orf147Q96MC9 270 aaPredicted RBP13.73□□□□□ -0.21
PKP3-209ENST00000533069 NRIP2Q9BQI9 281 aa13.73□□□□□ -0.21
PKP3-209ENST00000533069 CHCHD6Q9BRQ6 235 aa13.73□□□□□ -0.21
PKP3-209ENST00000533069 NEK6Q9HC98 313 aa13.73□□□□□ -0.21
PKP3-209ENST00000533069 NOX4Q9NPH5 578 aa13.73□□□□□ -0.21
PKP3-209ENST00000533069 ONECUT1Q9UBC0 465 aa13.73□□□□□ -0.21
PKP3-209ENST00000533069 TRBV23-1A0A0A0MS06 115 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 IGHV1-69DA0A0B4J2H0 117 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 LOC100506127A0A0U1RQW1 187 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 A6NIN4 97 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 TMEM127O75204 238 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 IGHV1-69P01742 117 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 UCHL1P09936 223 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 NDUFB7P17568 137 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 MYL9P24844 172 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 RPS11P62280 158 aaKnown RBP eCLIP13.72□□□□□ -0.21
PKP3-209ENST00000533069 FABP5Q01469 135 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 IL24Q13007 206 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 CNN3Q15417 329 aaKnown RBP13.72□□□□□ -0.21
PKP3-209ENST00000533069 SLC9A3R2Q15599 337 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 CTF1Q16619 201 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 DEFB112Q30KQ8 113 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 CEACAM19Q7Z692 300 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 TPRA1Q86W33 373 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 OR13C3Q8NGS6 347 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 LHX4Q969G2 390 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 ZDHHC16Q969W1 377 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 TMEM106AQ96A25 262 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 OR51E2Q9H255 320 aa13.72□□□□□ -0.21
PKP3-209ENST00000533069 TXNL4BQ9NX01 149 aaKnown RBP13.72□□□□□ -0.21
PKP3-209ENST00000533069 TRAV1-2A0A0B4J238 106 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 SYNGR1O43759 233 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 GPX5O75715 221 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 NXPH2O95156 264 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 HKR1P10072 659 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 ZNF20P17024 532 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 FSTP19883 344 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 MTNR1BP49286 362 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 PSMD7P51665 324 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 FUT6P51993 359 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 UBE2V2Q15819 145 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 HSD17B12Q53GQ0 312 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 RUSC1-AS1Q66K80 236 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 METAP1DQ6UB28 335 aaPredicted RBP13.71□□□□□ -0.21
PKP3-209ENST00000533069 TMEM91Q6ZNR0 172 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 C1orf122Q6ZSJ8 110 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 VMO1Q7Z5L0 202 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 SERPINA12Q8IW75 414 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 PARP16Q8N5Y8 322 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 TMEM185AQ8NFB2 350 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 OR5D14Q8NGL3 314 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 RGP1Q92546 391 aaPredicted RBP13.71□□□□□ -0.21
PKP3-209ENST00000533069 DUX5Q96PT3 197 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 DERL3Q96Q80 235 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 HES4Q9HCC6 221 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms