RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 PRKACAP17612 351 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 OR3A4PP47883 348 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 PSMD7P51665 324 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 CAV3P56539 151 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 IKZF1Q13422 519 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 GPR176Q14439 515 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 DGUOKQ16854 277 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 C1QL2Q7Z5L3 287 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 LRRTM1Q86UE6 522 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 LYPD6Q86Y78 171 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 BATF2Q8N1L9 274 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 CD177Q8N6Q3 437 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 FAM216BQ8N7L0 139 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 RAB40AQ8WXH6 277 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 TMEM158Q8WZ71 300 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 DMRTB1Q96MA1 342 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 FAM234AQ9H0X4 552 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 METTL9Q9H1A3 318 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 CNTD2Q9H8S5 307 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 ELL3Q9HB65 397 aaPredicted RBP12.7□□□□□ -0.38
CCS-206ENST00000530961 IL36GQ9NZH8 169 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 GHRLQ9UBU3 117 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 SLC25A10Q9UBX3 287 aaPredicted RBP12.7□□□□□ -0.38
CCS-206ENST00000530961 OR14J1Q9UGF5 321 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 STUB1Q9UNE7 303 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 ING4Q9UNL4 249 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 TRAV1-2A0A0B4J238 106 aa12.69□□□□□ -0.38
CCS-206ENST00000530961 SH2D1BO14796 132 aa12.69□□□□□ -0.38
CCS-206ENST00000530961 CSTBP04080 98 aaKnown RBP12.69□□□□□ -0.38
CCS-206ENST00000530961 ADRA2CP18825 462 aa12.69□□□□□ -0.38
CCS-206ENST00000530961 CALRP27797 417 aaKnown RBP12.69□□□□□ -0.38
CCS-206ENST00000530961 FGF9P31371 208 aaPredicted RBP12.69□□□□□ -0.38
CCS-206ENST00000530961 RANBP1P43487 201 aa12.69□□□□□ -0.38
CCS-206ENST00000530961 FGF12P61328 243 aa12.69□□□□□ -0.38
CCS-206ENST00000530961 DCAF12L2Q5VW00 463 aa12.69□□□□□ -0.38
CCS-206ENST00000530961 FAHD2BQ6P2I3 314 aaPredicted RBP12.69□□□□□ -0.38
CCS-206ENST00000530961 BTNL3Q6UXE8 466 aa12.69□□□□□ -0.38
CCS-206ENST00000530961 TEX29Q8N6K0 151 aa12.69□□□□□ -0.38
CCS-206ENST00000530961 FAHD2AQ96GK7 314 aa12.69□□□□□ -0.38
CCS-206ENST00000530961 SSR3Q9UNL2 185 aa12.69□□□□□ -0.38
CCS-206ENST00000530961 GSTK1Q9Y2Q3 226 aa12.69□□□□□ -0.38
CCS-206ENST00000530961 KIR2DS1A0A191URI9 304 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 A0A1B0GW55 424 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 ENSAO43768 121 aaKnown RBP12.68□□□□□ -0.38
CCS-206ENST00000530961 CDRT1O95170 752 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 HAND1O96004 215 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 DUX4L2P0CJ85 424 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 DUX4L3P0CJ86 424 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 DUX4L4P0CJ87 422 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 DUX4L5P0CJ88 424 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 DUX4L6P0CJ89 424 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 DUX4L7P0CJ90 424 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 CD36P16671 472 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 PAX2Q02962 417 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 CR1LQ2VPA4 569 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 C1orf100Q5SVJ3 147 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 AWAT2Q6E213 333 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 DUX4L9Q6RFH8 374 aaPredicted RBP12.68□□□□□ -0.38
CCS-206ENST00000530961 BTN2A1Q7KYR7 527 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 ZNRF1Q8ND25 227 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 TMEM185AQ8NFB2 350 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 OR51T1Q8NGJ9 327 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 OR5D13Q8NGL4 314 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 TBC1D15Q8TC07 691 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 ST8SIA4Q92187 359 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 DACT3Q96B18 629 aaPredicted RBP12.68□□□□□ -0.38
CCS-206ENST00000530961 MRPS24Q96EL2 167 aaKnown RBP12.68□□□□□ -0.38
CCS-206ENST00000530961 MMP26Q9NRE1 261 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 DUX4Q9UBX2 424 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 MRPS28Q9Y2Q9 187 aaKnown RBP12.68□□□□□ -0.38
CCS-206ENST00000530961 INSIG2Q9Y5U4 225 aa12.68□□□□□ -0.38
CCS-206ENST00000530961 IGHV2-70DA0A0C4DH43 119 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 K7N7A8 449 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 PDCD5O14737 125 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 HTR3BO95264 441 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 TFF1P04155 84 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 UBBP0CG47 229 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 GTF2F2P13984 249 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 MYL9P24844 172 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 LMO1P25800 156 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 CAPZA1P52907 286 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 COL10A1Q03692 680 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 PAX8Q06710 450 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 IL13RA2Q14627 380 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 TIMM50Q3ZCQ8 353 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 SLC22A6Q4U2R8 563 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 NHLRC3Q5JS37 347 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 GLIPR1L1Q6UWM5 242 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 GDPGP1Q6ZNW5 385 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 CHST4Q8NCG5 386 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 OR4D6Q8NGJ1 314 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 PPP1R35Q8TAP8 253 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 SNX22Q96L94 193 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 NKX3-1Q99801 234 aaPredicted RBP12.67□□□□□ -0.38
CCS-206ENST00000530961 NUDT16L1Q9BRJ7 211 aaKnown RBP12.67□□□□□ -0.38
CCS-206ENST00000530961 C7orf69Q9H7B7 122 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 EXOSC4Q9NPD3 245 aaKnown RBP12.67□□□□□ -0.38
CCS-206ENST00000530961 IL36RNQ9UBH0 155 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 LPAR3Q9UBY5 353 aa12.67□□□□□ -0.38
CCS-206ENST00000530961 RPUSD1Q9UJJ7 312 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms