RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 BEX1Q9HBH7 125 aa12.69□□□□□ -0.38
CAPN1-213ENST00000527897 DHDHQ9UQ10 334 aa12.69□□□□□ -0.38
CAPN1-213ENST00000527897 GSTK1Q9Y2Q3 226 aa12.69□□□□□ -0.38
CAPN1-213ENST00000527897 ZNF737O75373 536 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 LIMS3P0CW19 117 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 LIMS4P0CW20 117 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 PAX6P26367 422 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 SOX2P48431 317 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 ETV1P50549 477 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 BMXP51813 675 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 RELBQ01201 579 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 MRPL28Q13084 256 aaKnown RBP12.68□□□□□ -0.38
CAPN1-213ENST00000527897 GRK1Q15835 563 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 TAF9Q16594 264 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 TTC23Q5W5X9 447 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 HCP5Q6MZN7 132 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 OR8H2Q8N162 312 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 DHRSXQ8N5I4 330 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 TPRX1Q8N7U7 411 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 ZSCAN4Q8NAM6 433 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-213ENST00000527897 SGMS2Q8NHU3 365 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 SNX22Q96L94 193 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 ZNF649Q9BS31 505 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 HEXA-AS1Q9H8Q6 139 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 FGF20Q9NP95 211 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-213ENST00000527897 MRPS18AQ9NVS2 196 aaKnown RBP12.68□□□□□ -0.38
CAPN1-213ENST00000527897 GLS2Q9UI32 602 aa12.68□□□□□ -0.38
CAPN1-213ENST00000527897 TMEM82A0PJX8 343 aa12.67□□□□□ -0.38
CAPN1-213ENST00000527897 POM121CA8CG34 1229 aa12.67□□□□□ -0.38
CAPN1-213ENST00000527897 SIRPB1O00241 398 aa12.67□□□□□ -0.38
CAPN1-213ENST00000527897 TMEM225BP0DP42 221 aa12.67□□□□□ -0.38
CAPN1-213ENST00000527897 MYL12AP19105 171 aa12.67□□□□□ -0.38
CAPN1-213ENST00000527897 LGALS4P56470 323 aa12.67□□□□□ -0.38
CAPN1-213ENST00000527897 SCN1BQ07699 218 aa12.67□□□□□ -0.38
CAPN1-213ENST00000527897 OR2G6Q5TZ20 316 aa12.67□□□□□ -0.38
CAPN1-213ENST00000527897 TMPRSS11AQ6ZMR5 421 aa12.67□□□□□ -0.38
CAPN1-213ENST00000527897 GDPGP1Q6ZNW5 385 aa12.67□□□□□ -0.38
CAPN1-213ENST00000527897 SATL1Q86VE3 508 aa12.67□□□□□ -0.38
CAPN1-213ENST00000527897 SERPINA12Q8IW75 414 aa12.67□□□□□ -0.38
CAPN1-213ENST00000527897 SETD9Q8NE22 299 aa12.67□□□□□ -0.38
CAPN1-213ENST00000527897 OR5D14Q8NGL3 314 aa12.67□□□□□ -0.38
CAPN1-213ENST00000527897 DSCAML1Q8TD84 2053 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 IGKV1-12A0A0C4DH73 117 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 IRGMA1A4Y4 181 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 H3BUX3 64 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 SULT1B1O43704 296 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 IGKV1D-12P01611 117 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 RPSAP08865 295 aaKnown RBP12.66□□□□□ -0.38
CAPN1-213ENST00000527897 DCKP27707 260 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 LY6EQ16553 131 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 MIDNQ504T8 468 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 XAF1Q6GPH4 301 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 DHRS7BQ6IAN0 325 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-213ENST00000527897 C17orf107Q6ZR85 190 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 PACRGLQ8N7B6 248 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 OR52N4Q8NGI2 321 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 GPER1Q99527 375 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 HMG20AQ9NP66 347 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 EXOSC4Q9NPD3 245 aaKnown RBP12.66□□□□□ -0.38
CAPN1-213ENST00000527897 CHCHD3Q9NX63 227 aaKnown RBP12.66□□□□□ -0.38
CAPN1-213ENST00000527897 ING3Q9NXR8 418 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 VPREB3Q9UKI3 123 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 PCDHGB5Q9Y5G0 923 aa12.66□□□□□ -0.38
CAPN1-213ENST00000527897 SH2D1BO14796 132 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 MAGEB3O15480 346 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 PSPNO60542 156 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 NDUFA7O95182 113 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 MT-ND2P03891 347 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 ZNF728P0DKX0 622 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 ZNF44P15621 663 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 SRSF4Q08170 494 aaKnown RBP12.65□□□□□ -0.38
CAPN1-213ENST00000527897 DYNC1I2Q13409 638 aaKnown RBP12.65□□□□□ -0.38
CAPN1-213ENST00000527897 ZNF146Q15072 292 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 KISS1Q15726 138 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 PLA1AQ53H76 456 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 SPIN3Q5JUX0 258 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 OLFML2AQ68BL7 652 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 TRAPPC6BQ86SZ2 158 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 C11orf42Q8N5U0 333 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 BEND2Q8NDZ0 799 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 OR4S1Q8NGB4 309 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 PPP1R35Q8TAP8 253 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 HAVCR2Q8TDQ0 301 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 ZNF714Q96N38 554 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 SSX3Q99909 188 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 FAM192AQ9GZU8 254 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 PPA2Q9H2U2 334 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 C8orf4Q9NR00 106 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 TAS2R4Q9NYW5 299 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 CLEC2DQ9UHP7 191 aa12.65□□□□□ -0.38
CAPN1-213ENST00000527897 EXOSC1Q9Y3B2 195 aaKnown RBP12.65□□□□□ -0.38
CAPN1-213ENST00000527897 A0A1B0GUS0 222 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 hADV38S2A0JD32 116 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 CLPSL1A2RUU4 121 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 C17orf98A8MV24 154 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 KDM4BO94953 1096 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 OR2H2O95918 312 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 ARG1P05089 322 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 RAB3AP20336 220 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 CAPGP40121 348 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms