RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 RPUSD4Q96CM3 377 aaKnown RBP10.95□□□□□ -0.66
TSKU-203ENST00000527881 RCC1LQ96I51 464 aaKnown RBP10.95□□□□□ -0.66
TSKU-203ENST00000527881 NUDT22Q9BRQ3 303 aa10.95□□□□□ -0.66
TSKU-203ENST00000527881 NAGKQ9UJ70 344 aa10.95□□□□□ -0.66
TSKU-203ENST00000527881 MANSC4A6NHS7 340 aaPredicted RBP10.94□□□□□ -0.66
TSKU-203ENST00000527881 ZNF43P17038 809 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 ECI1P42126 302 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 GALR1P47211 349 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 ARL6IP1Q15041 203 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 SPIN3Q5JUX0 258 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 THEM4Q5T1C6 240 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 SSX7Q7RTT5 188 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 OR11L1Q8NGX0 322 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 TMEM106CQ9BVX2 250 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 UBE2J1Q9Y385 318 aaPredicted RBP10.94□□□□□ -0.66
TSKU-203ENST00000527881 H3BP45 60 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 MSTNO14793 375 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 CA11O75493 328 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 TSLPQ969D9 159 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 NUDT16L1Q9BRJ7 211 aaKnown RBP10.94□□□□□ -0.66
TSKU-203ENST00000527881 HDAC8Q9BY41 377 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 NXF5Q9H1B4 397 aaKnown RBP10.94□□□□□ -0.66
TSKU-203ENST00000527881 CALHM2Q9HA72 323 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 CERS4Q9HA82 394 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 FAM206AQ9NX38 181 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 PAM16Q9Y3D7 125 aa10.94□□□□□ -0.66
TSKU-203ENST00000527881 TMED7-TICAM2A0A0A6YYA0 188 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 TGFBR3LH3BV60 316 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 SRSF10O75494 262 aaKnown RBP10.93□□□□□ -0.66
TSKU-203ENST00000527881 HPRT1P00492 218 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 CTSBP07858 339 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 SELEP16581 610 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 CCKARP32238 428 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 DRD3P35462 400 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 HERV-K104P61576 105 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 LIAT1Q6ZQX7 453 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 SLC25A26Q70HW3 274 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 C1QL2Q7Z5L3 287 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 C11orf42Q8N5U0 333 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 SLC38A9Q8NBW4 561 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 PATE1Q8WXA2 126 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 TWSG1Q9GZX9 223 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 TUBG2Q9NRH3 451 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 MCTS1Q9ULC4 181 aaKnown RBP10.93□□□□□ -0.66
TSKU-203ENST00000527881 MTCH2Q9Y6C9 303 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 USP34Q70CQ2 3546 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 TP53I11O14683 189 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 FCGR2AP12318 317 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 LMO1P25800 156 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 CD82P27701 267 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 TNFSF10P50591 281 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 GPM6BQ13491 265 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 TMEM187Q14656 261 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 CST6Q15828 149 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 ZNF100Q8IYN0 542 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 OR5AS1Q8N127 324 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 C11orf40Q8WZ69 217 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 PIGTQ969N2 578 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 LRRC3BQ96PB8 259 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 APOOQ9BUR5 198 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 PLEKHF2Q9H8W4 249 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 CDH20Q9HBT6 801 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 DNAJC4Q9NNZ3 241 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 LOC102723971A0A1B0GUV8 181 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 NKX2-6A6NCS4 301 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 SERPINE3A8MV23 424 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 H0YIG0 161 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 IFNA5P01569 189 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 CD33P20138 364 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 RND2P52198 227 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 ZNF154Q13106 437 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 PRTGQ2VWP7 1150 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 C1orf194Q5T5A4 169 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 CRIPAKQ8N1N5 446 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 LPAR2Q9HBW0 351 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 SLC2A9Q9NRM0 540 aa10.93□□□□□ -0.66
TSKU-203ENST00000527881 POLR3KQ9Y2Y1 108 aaPredicted RBP10.93□□□□□ -0.66
TSKU-203ENST00000527881 IGKV1D-43A0A0B4J1Z2 117 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 PRSS38A1L453 326 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 C17orf105B2RV13 164 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 WISP1O95388 367 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 BRICD5Q6PL45 260 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 ZNF573Q86YE8 665 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 ZNF695Q8IW36 515 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 TMEM171Q8WVE6 324 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 RNF133Q8WVZ7 376 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 P4HTMQ9NXG6 502 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 ANXA10Q9UJ72 324 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 HCRTR1O43613 425 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 PLRG1O43660 514 aaKnown RBP10.92□□□□□ -0.66
TSKU-203ENST00000527881 MT-ATP6P00846 226 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 PGCP20142 388 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 IL11P20809 199 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 OR10J1P30954 320 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 MRPS11P82912 194 aaKnown RBP10.92□□□□□ -0.66
TSKU-203ENST00000527881 KISS1Q15726 138 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 FAM90A2PQ658T7 463 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 TMEM252Q8N6L7 170 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 RRAGCQ9HB90 399 aa10.92□□□□□ -0.66
TSKU-203ENST00000527881 PITX3O75364 302 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms