RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 SNX22Q96L94 193 aa15.11■□□□□ 0.01
CAPN1-203ENST00000525013 SPACA5Q96QH8 159 aa15.11■□□□□ 0.01
CAPN1-203ENST00000525013 ERVK13-1Q9NX77 482 aa15.11■□□□□ 0.01
CAPN1-203ENST00000525013 RPL36Q9Y3U8 105 aaKnown RBP15.11■□□□□ 0.01
CAPN1-203ENST00000525013 TRBV2A0A0J9YWF9 115 aa15.1■□□□□ 0.01
CAPN1-203ENST00000525013 TMEM82A0PJX8 343 aa15.1■□□□□ 0.01
CAPN1-203ENST00000525013 IGHA1P01876 353 aa15.1■□□□□ 0.01
CAPN1-203ENST00000525013 ZNF728P0DKX0 622 aa15.1■□□□□ 0.01
CAPN1-203ENST00000525013 PRKACAP17612 351 aa15.1■□□□□ 0.01
CAPN1-203ENST00000525013 TGFBR2P37173 567 aa15.1■□□□□ 0.01
CAPN1-203ENST00000525013 BMXP51813 675 aa15.1■□□□□ 0.01
CAPN1-203ENST00000525013 RAB40BQ12829 278 aa15.1■□□□□ 0.01
CAPN1-203ENST00000525013 PDZK1IP1Q13113 114 aa15.1■□□□□ 0.01
CAPN1-203ENST00000525013 LY6EQ16553 131 aa15.1■□□□□ 0.01
CAPN1-203ENST00000525013 OR52I1Q8NGK6 324 aa15.1■□□□□ 0.01
CAPN1-203ENST00000525013 AJUBAQ96IF1 538 aa15.1■□□□□ 0.01
CAPN1-203ENST00000525013 CHST6Q9GZX3 395 aa15.1■□□□□ 0.01
CAPN1-203ENST00000525013 PPA2Q9H2U2 334 aa15.1■□□□□ 0.01
CAPN1-203ENST00000525013 NEK6Q9HC98 313 aa15.1■□□□□ 0.01
CAPN1-203ENST00000525013 INPP5EQ9NRR6 644 aa15.1■□□□□ 0.01
CAPN1-203ENST00000525013 GLS2Q9UI32 602 aa15.1■□□□□ 0.01
CAPN1-203ENST00000525013 C17orf98A8MV24 154 aa15.09■□□□□ 0.01
CAPN1-203ENST00000525013 PEX2P28328 305 aa15.09■□□□□ 0.01
CAPN1-203ENST00000525013 GBX2P52951 348 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-203ENST00000525013 DLX6P56179 175 aa15.09■□□□□ 0.01
CAPN1-203ENST00000525013 GRK1Q15835 563 aa15.09■□□□□ 0.01
CAPN1-203ENST00000525013 LRRC75BQ2VPJ9 315 aa15.09■□□□□ 0.01
CAPN1-203ENST00000525013 KLHL22Q53GT1 634 aa15.09■□□□□ 0.01
CAPN1-203ENST00000525013 TREML4Q6UXN2 200 aa15.09■□□□□ 0.01
CAPN1-203ENST00000525013 OR5D18Q8NGL1 313 aa15.09■□□□□ 0.01
CAPN1-203ENST00000525013 OR5AK2Q8NH90 309 aa15.09■□□□□ 0.01
CAPN1-203ENST00000525013 ZCCHC4Q9H5U6 513 aa15.09■□□□□ 0.01
CAPN1-203ENST00000525013 SMPD3Q9NY59 655 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-203ENST00000525013 hADV38S2A0JD32 116 aa15.08■□□□□ 0
CAPN1-203ENST00000525013 TMEM212A6NML5 194 aa15.08■□□□□ 0
CAPN1-203ENST00000525013 E9PI62 339 aa15.08■□□□□ 0
CAPN1-203ENST00000525013 ZFPL1O95159 310 aa15.08■□□□□ 0
CAPN1-203ENST00000525013 MEF2CQ06413 473 aaPredicted RBP15.08■□□□□ 0
CAPN1-203ENST00000525013 MRPL28Q13084 256 aaKnown RBP15.08■□□□□ 0
CAPN1-203ENST00000525013 ZSCAN26Q16670 478 aa15.08■□□□□ 0
CAPN1-203ENST00000525013 TPRX1Q8N7U7 411 aa15.08■□□□□ 0
CAPN1-203ENST00000525013 OR52N4Q8NGI2 321 aa15.08■□□□□ 0
CAPN1-203ENST00000525013 OR13D1Q8NGV5 346 aa15.08■□□□□ 0
CAPN1-203ENST00000525013 TSEN15Q8WW01 171 aaKnown RBP15.08■□□□□ 0
CAPN1-203ENST00000525013 APH1BQ8WW43 257 aa15.08■□□□□ 0
CAPN1-203ENST00000525013 ZNF714Q96N38 554 aa15.08■□□□□ 0
CAPN1-203ENST00000525013 PDCD1LG2Q9BQ51 273 aa15.08■□□□□ 0
CAPN1-203ENST00000525013 COMMD4Q9H0A8 199 aa15.08■□□□□ 0
CAPN1-203ENST00000525013 MEGF9Q9H1U4 602 aa15.08■□□□□ 0
CAPN1-203ENST00000525013 GSTK1Q9Y2Q3 226 aa15.08■□□□□ 0
CAPN1-203ENST00000525013 VWFP04275 2813 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 SIRPB1O00241 398 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 SH2D1BO14796 132 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 MT-ND2P03891 347 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 ARG1P05089 322 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 HCKP08631 526 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 RPSAP08865 295 aaKnown RBP15.07■□□□□ 0
CAPN1-203ENST00000525013 CCDC159P0C7I6 412 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 KRTAP10-3P60369 221 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 SMN1Q16637 294 aaKnown RBP15.07■□□□□ 0
CAPN1-203ENST00000525013 SPIN3Q5JUX0 258 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 RNF144BQ7Z419 303 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 LHFPL4Q7Z7J7 247 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 OR5D14Q8NGL3 314 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 PPP1R35Q8TAP8 253 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 RDH12Q96NR8 316 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 CITED1Q99966 193 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 ZNF649Q9BS31 505 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 C16orf95Q9H693 158 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 SEBOXQ9HB31 216 aaPredicted RBP15.07■□□□□ 0
CAPN1-203ENST00000525013 HMG20AQ9NP66 347 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 MRPS18AQ9NVS2 196 aaKnown RBP15.07■□□□□ 0
CAPN1-203ENST00000525013 DHDHQ9UQ10 334 aa15.07■□□□□ 0
CAPN1-203ENST00000525013 IGKV1-12A0A0C4DH73 117 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 PSPNO60542 156 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 TSPAN9O75954 239 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 CLPXO76031 633 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 IGKV1D-12P01611 117 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 RBP4P02753 201 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 TMEM225BP0DP42 221 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 PROK1P58294 105 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 SCN1BQ07699 218 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 DYNC1I2Q13409 638 aaKnown RBP15.06■□□□□ 0
CAPN1-203ENST00000525013 ZNF146Q15072 292 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 LRRC36Q1X8D7 754 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 PLA1AQ53H76 456 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 SLC35E4Q6ICL7 350 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 TRAPPC6BQ86SZ2 158 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 SERPINA12Q8IW75 414 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 OR4S1Q8NGB4 309 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 CYGBQ8WWM9 190 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 EXOSC4Q9NPD3 245 aaKnown RBP15.06■□□□□ 0
CAPN1-203ENST00000525013 PCDHGB5Q9Y5G0 923 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 MEGF8Q7Z7M0 2845 aa15.06■□□□□ 0
CAPN1-203ENST00000525013 MGST3O14880 152 aa15.05■□□□□ -0
CAPN1-203ENST00000525013 TIMM23O14925 209 aa15.05■□□□□ -0
CAPN1-203ENST00000525013 WBP4O75554 376 aaKnown RBP15.05■□□□□ -0
CAPN1-203ENST00000525013 KDM4BO94953 1096 aa15.05■□□□□ -0
CAPN1-203ENST00000525013 LIMS3P0CW19 117 aa15.05■□□□□ -0
CAPN1-203ENST00000525013 LIMS4P0CW20 117 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms