RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 HLA-DQA1Q5Y7H0 255 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 RPL7L1Q6DKI1 246 aaKnown RBP6.8□□□□□ -1.32
SPIDR-223ENST00000524033 OPN5Q6U736 354 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 GLIPR1L1Q6UWM5 242 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 FOXL2NBQ6ZUU3 175 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 LURAP1LQ8IV03 231 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 OR10H5Q8NGA6 315 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 OR56B1Q8NGI3 324 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 OR5D14Q8NGL3 314 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 OR5H2Q8NGV7 314 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 OR14K1Q8NGZ2 314 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 EMG1Q92979 244 aaKnown RBP6.8□□□□□ -1.32
SPIDR-223ENST00000524033 HIST1H2BAQ96A08 127 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 RAB3CQ96E17 227 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 ARL5BQ96KC2 179 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 C5orf34Q96MH7 638 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 MICU1Q9BPX6 476 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 CMSS1Q9BQ75 279 aaKnown RBP6.8□□□□□ -1.32
SPIDR-223ENST00000524033 MESP1Q9BRJ9 268 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 SOX7Q9BT81 388 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 TMEM59Q9BXS4 323 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 VN1R1Q9GZP7 353 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 SEBOXQ9HB31 216 aaPredicted RBP6.8□□□□□ -1.32
SPIDR-223ENST00000524033 SERINC1Q9NRX5 453 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 CENPMQ9NSP4 180 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 MED29Q9NX70 200 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 CACFD1Q9UGQ2 172 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 ATPIF1Q9UII2 106 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 ERRFI1Q9UJM3 462 aaPredicted RBP6.8□□□□□ -1.32
SPIDR-223ENST00000524033 B3GALT5Q9Y2C3 310 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 AMDHD2Q9Y303 409 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 FAM96BQ9Y3D0 163 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 NBASA2RRP1 2371 aa6.8□□□□□ -1.32
SPIDR-223ENST00000524033 NCOA6Q14686 2063 aaPredicted RBP6.8□□□□□ -1.32
SPIDR-223ENST00000524033 IGLV3-12A0A075B6K2 115 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 NSG1A0A0A6YYJ2 146 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 C13orf42A0A1B0GVH6 325 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 C5orf52A6NGY3 159 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 PCP4L1A6NKN8 68 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 PRSS44E7EML9 344 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 EFNA2O43921 213 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 EIF3GO75821 320 aaKnown RBP eCLIP6.79□□□□□ -1.32
SPIDR-223ENST00000524033 CST4P01036 141 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 HPNP05981 417 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 SFTA3P0C7M3 94 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 RNF224P0DH78 156 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 PGA4P0DJD7 388 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 PGA3P0DJD8 388 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 AMY2BP19961 511 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 AGAP20933 346 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 NFYBP25208 207 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 MAS1LP35410 378 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 GNALP38405 381 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 PTGDSP41222 190 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 ECI1P42126 302 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 KCNJ3P48549 501 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 NPY4RP50391 375 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 ZNF133P52736 654 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-223ENST00000524033 SUCLG1P53597 346 aaKnown RBP6.79□□□□□ -1.32
SPIDR-223ENST00000524033 DVL1P1P54792 670 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-223ENST00000524033 BIDP55957 195 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 FAM3AP98173 230 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 RBM39Q14498 530 aaKnown RBP6.79□□□□□ -1.32
SPIDR-223ENST00000524033 HMGN3Q15651 99 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 HIST3H3Q16695 136 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 EIF5AL1Q6IS14 154 aaKnown RBP6.79□□□□□ -1.32
SPIDR-223ENST00000524033 SLC16A14Q7RTX9 510 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-223ENST00000524033 COMMD1Q8N668 190 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 ST6GALNAC3Q8NDV1 305 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 NFAM1Q8NET5 270 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-223ENST00000524033 POC1BQ8TC44 478 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 OR51E1Q8TCB6 317 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 SLC25A43Q8WUT9 341 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-223ENST00000524033 MALSU1Q96EH3 234 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 ARHGAP5-AS1Q96IT6 56 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 PECRQ9BY49 303 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 TUBA4BQ9H853 241 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 SMCO4Q9NRQ5 59 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 PRR13Q9NZ81 148 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 ZNF319Q9P2F9 582 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 GHRLQ9UBU3 117 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 COPS7AQ9UBW8 275 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 FBXL17Q9UF56 701 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 STARD10Q9Y365 291 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 KPTNQ9Y664 436 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 V9GYS6 101 aa6.79□□□□□ -1.32
SPIDR-223ENST00000524033 NOTCH2Q04721 2471 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 A0A1B0GW64 132 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 A0A1W2PP11 408 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 CRYM-AS1A6NIL9 109 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 MED6O75586 246 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 DEDDO75618 318 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 CLDN1O95832 211 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 S100A8P05109 93 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 SERPINA7P05543 415 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 CTSDP07339 412 aaPredicted RBP6.78□□□□□ -1.32
SPIDR-223ENST00000524033 PTAFRP25105 342 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 PTGFRP43088 359 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 AKR1D1P51857 326 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 383.3 ms