RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 TMEM155Q4W5P6 130 aa20.19■□□□□ 0.82
PVT1-212ENST00000521951 SELENOIQ9C0D9 397 aa20.19■□□□□ 0.82
PVT1-212ENST00000521951 ST3GAL6Q9Y274 331 aa20.19■□□□□ 0.82
PVT1-212ENST00000521951 SETXQ7Z333 2677 aaKnown RBP20.19■□□□□ 0.82
PVT1-212ENST00000521951 MAP1AP78559 2803 aaPredicted RBP20.18■□□□□ 0.82
PVT1-212ENST00000521951 AMY2BP19961 511 aa20.18■□□□□ 0.82
PVT1-212ENST00000521951 CEBPDP49716 269 aaPredicted RBP20.18■□□□□ 0.82
PVT1-212ENST00000521951 RBM11P57052 281 aaKnown RBP20.18■□□□□ 0.82
PVT1-212ENST00000521951 KCNJ8Q15842 424 aa20.18■□□□□ 0.82
PVT1-212ENST00000521951 NHLRC3Q5JS37 347 aa20.18■□□□□ 0.82
PVT1-212ENST00000521951 SPIN3Q5JUX0 258 aa20.18■□□□□ 0.82
PVT1-212ENST00000521951 CD177Q8N6Q3 437 aa20.18■□□□□ 0.82
PVT1-212ENST00000521951 OR5H6Q8NGV6 325 aa20.18■□□□□ 0.82
PVT1-212ENST00000521951 LGALS14Q8TCE9 139 aa20.18■□□□□ 0.82
PVT1-212ENST00000521951 MRI1Q9BV20 369 aa20.18■□□□□ 0.82
PVT1-212ENST00000521951 TMEM59Q9BXS4 323 aa20.18■□□□□ 0.82
PVT1-212ENST00000521951 NARFLQ9H6Q4 476 aa20.18■□□□□ 0.82
PVT1-212ENST00000521951 ABRACLQ9P1F3 81 aa20.18■□□□□ 0.82
PVT1-212ENST00000521951 ZNF222Q9UK12 451 aa20.18■□□□□ 0.82
PVT1-212ENST00000521951 ITGB1BP2Q9UKP3 347 aa20.18■□□□□ 0.82
PVT1-212ENST00000521951 SLC25A16P16260 332 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 PRDX2P32119 198 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 SOX6P35712 828 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 GABRA2P47869 451 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 ATPAF1Q5TC12 328 aaPredicted RBP20.17■□□□□ 0.82
PVT1-212ENST00000521951 LYPD2Q6UXB3 125 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 DCDC5Q6ZRR9 648 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 KCTD12Q96CX2 325 aaKnown RBP20.17■□□□□ 0.82
PVT1-212ENST00000521951 Q96M66 194 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 Q96MF0 132 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 CCL13Q99616 98 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 CCDC59Q9P031 241 aaKnown RBP20.17■□□□□ 0.82
PVT1-212ENST00000521951 RAB22AQ9UL26 194 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 NDUFA2O43678 99 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 EFNB2P52799 333 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 SCAND1P57086 179 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 RPS27AP62979 156 aaKnown RBP20.17■□□□□ 0.82
PVT1-212ENST00000521951 IL13RA2Q14627 380 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 PDCD1Q15116 288 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 METAP1DQ6UB28 335 aaPredicted RBP20.17■□□□□ 0.82
PVT1-212ENST00000521951 SPICQ8N5J4 248 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 GAL3ST1Q99999 423 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 DCUN1D5Q9BTE7 237 aa20.17■□□□□ 0.82
PVT1-212ENST00000521951 SEBOXQ9HB31 216 aaPredicted RBP20.17■□□□□ 0.82
PVT1-212ENST00000521951 CEACAM18A8MTB9 384 aa20.16■□□□□ 0.82
PVT1-212ENST00000521951 SH2D1BO14796 132 aa20.16■□□□□ 0.82
PVT1-212ENST00000521951 GEMIN2O14893 280 aaKnown RBP20.16■□□□□ 0.82
PVT1-212ENST00000521951 HAND1O96004 215 aa20.16■□□□□ 0.82
PVT1-212ENST00000521951 TAF9Q16594 264 aa20.16■□□□□ 0.82
PVT1-212ENST00000521951 Q6P435 159 aa20.16■□□□□ 0.82
PVT1-212ENST00000521951 ZNF788Q6ZQV5 615 aa20.16■□□□□ 0.82
PVT1-212ENST00000521951 WFDC11Q8NEX6 87 aa20.16■□□□□ 0.82
PVT1-212ENST00000521951 PTX4Q96A99 478 aa20.16■□□□□ 0.82
PVT1-212ENST00000521951 DNTTIP1Q9H147 329 aa20.16■□□□□ 0.82
PVT1-212ENST00000521951 LPAR5Q9H1C0 372 aa20.16■□□□□ 0.82
PVT1-212ENST00000521951 GLS2Q9UI32 602 aa20.16■□□□□ 0.82
PVT1-212ENST00000521951 METRNQ9UJH8 293 aa20.16■□□□□ 0.82
PVT1-212ENST00000521951 SPATA2Q9UM82 520 aa20.16■□□□□ 0.82
PVT1-212ENST00000521951 ADAM20O43506 726 aa20.15■□□□□ 0.82
PVT1-212ENST00000521951 RAB6AP20340 208 aa20.15■□□□□ 0.82
PVT1-212ENST00000521951 SCN1BQ07699 218 aa20.15■□□□□ 0.82
PVT1-212ENST00000521951 CLDND2Q8NHS1 167 aa20.15■□□□□ 0.82
PVT1-212ENST00000521951 ACOT12Q8WYK0 555 aa20.15■□□□□ 0.82
PVT1-212ENST00000521951 SDSLQ96GA7 329 aa20.15■□□□□ 0.82
PVT1-212ENST00000521951 GAFA1Q96PS6 74 aa20.15■□□□□ 0.82
PVT1-212ENST00000521951 TM2D1Q9BX74 207 aa20.15■□□□□ 0.82
PVT1-212ENST00000521951 ZNF665Q9H7R5 613 aa20.15■□□□□ 0.82
PVT1-212ENST00000521951 ZNF581Q9P0T4 197 aa20.15■□□□□ 0.82
PVT1-212ENST00000521951 PCDHB10Q9UN67 800 aa20.15■□□□□ 0.82
PVT1-212ENST00000521951 ETV7Q9Y603 341 aa20.15■□□□□ 0.82
PVT1-212ENST00000521951 VPS13CQ709C8 3753 aa20.15■□□□□ 0.82
PVT1-212ENST00000521951 IGHV4-61A0A0C4DH41 118 aa20.14■□□□□ 0.81
PVT1-212ENST00000521951 A0A1B0GW55 424 aa20.14■□□□□ 0.81
PVT1-212ENST00000521951 DUX4L2P0CJ85 424 aa20.14■□□□□ 0.81
PVT1-212ENST00000521951 DUX4L3P0CJ86 424 aa20.14■□□□□ 0.81
PVT1-212ENST00000521951 DUX4L4P0CJ87 422 aa20.14■□□□□ 0.81
PVT1-212ENST00000521951 DUX4L5P0CJ88 424 aa20.14■□□□□ 0.81
PVT1-212ENST00000521951 DUX4L6P0CJ89 424 aa20.14■□□□□ 0.81
PVT1-212ENST00000521951 DUX4L7P0CJ90 424 aa20.14■□□□□ 0.81
PVT1-212ENST00000521951 IKZF1Q13422 519 aa20.14■□□□□ 0.81
PVT1-212ENST00000521951 DUX4L9Q6RFH8 374 aaPredicted RBP20.14■□□□□ 0.81
PVT1-212ENST00000521951 LINC00596Q86U02 117 aa20.14■□□□□ 0.81
PVT1-212ENST00000521951 AP3S1Q92572 193 aa20.14■□□□□ 0.81
PVT1-212ENST00000521951 NICN1Q9BSH3 213 aa20.14■□□□□ 0.81
PVT1-212ENST00000521951 URM1Q9BTM9 101 aaKnown RBP20.14■□□□□ 0.81
PVT1-212ENST00000521951 PATZ1Q9HBE1 687 aaKnown RBP20.14■□□□□ 0.81
PVT1-212ENST00000521951 COMMD3Q9UBI1 195 aa20.14■□□□□ 0.81
PVT1-212ENST00000521951 KAAG1Q9UBP8 84 aa20.14■□□□□ 0.81
PVT1-212ENST00000521951 DUX4Q9UBX2 424 aa20.14■□□□□ 0.81
PVT1-212ENST00000521951 MIOXQ9UGB7 285 aa20.14■□□□□ 0.81
PVT1-212ENST00000521951 MAB21L2Q9Y586 359 aa20.14■□□□□ 0.81
PVT1-212ENST00000521951 CYSRT1A8MQ03 144 aa20.13■□□□□ 0.81
PVT1-212ENST00000521951 DEGS1O15121 323 aa20.13■□□□□ 0.81
PVT1-212ENST00000521951 TMPRSS2O15393 492 aa20.13■□□□□ 0.81
PVT1-212ENST00000521951 OR2H2O95918 312 aa20.13■□□□□ 0.81
PVT1-212ENST00000521951 CHRM2P08172 466 aa20.13■□□□□ 0.81
PVT1-212ENST00000521951 GABRR1P24046 479 aa20.13■□□□□ 0.81
PVT1-212ENST00000521951 COL10A1Q03692 680 aa20.13■□□□□ 0.81
PVT1-212ENST00000521951 DYNC1I2Q13409 638 aaKnown RBP20.13■□□□□ 0.81
PVT1-212ENST00000521951 MPV17LQ2QL34 196 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms