RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 NEDD8Q15843 81 aa9.82□□□□□ -0.84
HPS4-218ENST00000519774 SSX1Q16384 188 aa9.82□□□□□ -0.84
HPS4-218ENST00000519774 HSD17B12Q53GQ0 312 aa9.82□□□□□ -0.84
HPS4-218ENST00000519774 UBE2UQ5VVX9 321 aa9.82□□□□□ -0.84
HPS4-218ENST00000519774 CD276Q5ZPR3 534 aa9.82□□□□□ -0.84
HPS4-218ENST00000519774 UNQ9370/PRO34162Q6UXP9 181 aa9.82□□□□□ -0.84
HPS4-218ENST00000519774 BTN2A1Q7KYR7 527 aa9.82□□□□□ -0.84
HPS4-218ENST00000519774 C1QL2Q7Z5L3 287 aa9.82□□□□□ -0.84
HPS4-218ENST00000519774 OR10K1Q8NGX5 313 aa9.82□□□□□ -0.84
HPS4-218ENST00000519774 RAB40AQ8WXH6 277 aa9.82□□□□□ -0.84
HPS4-218ENST00000519774 FCGR1BQ92637 280 aa9.82□□□□□ -0.84
HPS4-218ENST00000519774 SDSLQ96GA7 329 aa9.82□□□□□ -0.84
HPS4-218ENST00000519774 S100A13Q99584 98 aa9.82□□□□□ -0.84
HPS4-218ENST00000519774 MRI1Q9BV20 369 aa9.82□□□□□ -0.84
HPS4-218ENST00000519774 TCF7L1Q9HCS4 588 aa9.82□□□□□ -0.84
HPS4-218ENST00000519774 HMG20AQ9NP66 347 aa9.82□□□□□ -0.84
HPS4-218ENST00000519774 GSTK1Q9Y2Q3 226 aa9.82□□□□□ -0.84
HPS4-218ENST00000519774 SC5DO75845 299 aa9.81□□□□□ -0.84
HPS4-218ENST00000519774 CDRT1O95170 752 aa9.81□□□□□ -0.84
HPS4-218ENST00000519774 TNFAIP8O95379 198 aa9.81□□□□□ -0.84
HPS4-218ENST00000519774 HAND1O96004 215 aa9.81□□□□□ -0.84
HPS4-218ENST00000519774 AVPP01185 164 aa9.81□□□□□ -0.84
HPS4-218ENST00000519774 SFTPBP07988 381 aa9.81□□□□□ -0.84
HPS4-218ENST00000519774 SRD5A1P18405 259 aa9.81□□□□□ -0.84
HPS4-218ENST00000519774 PSMA1P25786 263 aaKnown RBP9.81□□□□□ -0.84
HPS4-218ENST00000519774 GABRA5P31644 462 aa9.81□□□□□ -0.84
HPS4-218ENST00000519774 PTGFRP43088 359 aa9.81□□□□□ -0.84
HPS4-218ENST00000519774 FABP5Q01469 135 aa9.81□□□□□ -0.84
HPS4-218ENST00000519774 COL10A1Q03692 680 aa9.81□□□□□ -0.84
HPS4-218ENST00000519774 ZNF561Q8N587 486 aa9.81□□□□□ -0.84
HPS4-218ENST00000519774 NKAIN3Q8N8D7 197 aa9.81□□□□□ -0.84
HPS4-218ENST00000519774 ZSCAN4Q8NAM6 433 aaPredicted RBP9.81□□□□□ -0.84
HPS4-218ENST00000519774 PXT1Q8NFP0 134 aa9.81□□□□□ -0.84
HPS4-218ENST00000519774 MUL1Q969V5 352 aa9.81□□□□□ -0.84
HPS4-218ENST00000519774 EXOSC4Q9NPD3 245 aaKnown RBP9.81□□□□□ -0.84
HPS4-218ENST00000519774 RPUSD1Q9UJJ7 312 aaKnown RBP9.81□□□□□ -0.84
HPS4-218ENST00000519774 ING4Q9UNL4 249 aa9.81□□□□□ -0.84
HPS4-218ENST00000519774 SF3B6Q9Y3B4 125 aaKnown RBP9.81□□□□□ -0.84
HPS4-218ENST00000519774 AUP1Q9Y679 476 aa9.81□□□□□ -0.84
HPS4-218ENST00000519774 KIR2DS1A0A191URI9 304 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 A0A1W2PQ09 198 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 SIRPB1O00241 398 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 CCRL2O00421 344 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 HTR3BO95264 441 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 ECDO95905 644 aaPredicted RBP9.8□□□□□ -0.84
HPS4-218ENST00000519774 CHRM2P08172 466 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 UCHL1P09936 223 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 PPIAL4GP0DN37 164 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 GABRR1P24046 479 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 MTNR1BP49286 362 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 GP2P55259 537 aaKnown RBP9.8□□□□□ -0.84
HPS4-218ENST00000519774 CAV3P56539 151 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 SCN1BQ07699 218 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 SPIN3Q5JUX0 258 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 TMEM91Q6ZNR0 172 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 C1orf229Q6ZS94 237 aaPredicted RBP9.8□□□□□ -0.84
HPS4-218ENST00000519774 FAM185AQ8N0U4 392 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 PHYHIPQ92561 330 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 DACT3Q96B18 629 aaPredicted RBP9.8□□□□□ -0.84
HPS4-218ENST00000519774 NR1H4Q96RI1 486 aaPredicted RBP9.8□□□□□ -0.84
HPS4-218ENST00000519774 DCTN5Q9BTE1 182 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 SLITRK2Q9H156 845 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 METTL9Q9H1A3 318 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 PPIL3Q9H2H8 161 aaKnown RBP9.8□□□□□ -0.84
HPS4-218ENST00000519774 NDUFB11Q9NX14 153 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 ONECUT1Q9UBC0 465 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 OPN4Q9UHM6 478 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 GLS2Q9UI32 602 aa9.8□□□□□ -0.84
HPS4-218ENST00000519774 MRPS28Q9Y2Q9 187 aaKnown RBP9.8□□□□□ -0.84
HPS4-218ENST00000519774 SETD2Q9BYW2 2564 aaPredicted RBP9.79□□□□□ -0.84
HPS4-218ENST00000519774 MEGF11A6BM72 1044 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 SH2D1BO14796 132 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 ARL6IP5O75915 188 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 CSTBP04080 98 aaKnown RBP9.79□□□□□ -0.84
HPS4-218ENST00000519774 TK1P04183 234 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 ZNF44P15621 663 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 HOXB4P17483 251 aaPredicted RBP9.79□□□□□ -0.84
HPS4-218ENST00000519774 SRMP19623 302 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 SERPINA2P20848 420 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 CALRP27797 417 aaKnown RBP9.79□□□□□ -0.84
HPS4-218ENST00000519774 RIPPLY3P57055 190 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 FGF12P61328 243 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 PAX8Q06710 450 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 ZNF146Q15072 292 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 PDCD1Q15116 288 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 LINC01559Q495D7 138 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 SLC22A6Q4U2R8 563 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 AWAT2Q6E213 333 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 GLIPR1L1Q6UWM5 242 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 LRRTM1Q86UE6 522 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 TSPAN14Q8NG11 270 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 PCGF1Q9BSM1 259 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 CHST6Q9GZX3 395 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 CNTD2Q9H8S5 307 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 RHOFQ9HBH0 211 aa9.79□□□□□ -0.84
HPS4-218ENST00000519774 IGHV3OR16-10A0A075B7F0 116 aa9.78□□□□□ -0.84
HPS4-218ENST00000519774 A0A087WXM4 84 aa9.78□□□□□ -0.84
HPS4-218ENST00000519774 TRAV40A0A0B4J280 105 aa9.78□□□□□ -0.84
HPS4-218ENST00000519774 TMEM82A0PJX8 343 aa9.78□□□□□ -0.84
HPS4-218ENST00000519774 K7N7A8 449 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms